Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ercc1P07903 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ercc1P07903 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ercc1P07903 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ercc1P07903 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ercc1P07903 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ercc1P07903 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ercc1P07903 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.11■□□□□ 0.17
Ercc1P07903 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ercc1P07903 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ercc1P07903 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ercc1P07903 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ercc1P07903 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc1P07903 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ercc1P07903 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Ercc1P07903 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc1P07903 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc1P07903 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc1P07903 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc1P07903 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc1P07903 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc1P07903 Gm10399-202ENSMUST00000202768 748 ntBASIC16.1■□□□□ 0.17
Ercc1P07903 Gm7143-201ENSMUST00000222811 859 ntBASIC16.1■□□□□ 0.17
Ercc1P07903 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc1P07903 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc1P07903 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc1P07903 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc1P07903 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc1P07903 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc1P07903 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc1P07903 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ercc1P07903 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Ercc1P07903 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc1P07903 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ercc1P07903 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc1P07903 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc1P07903 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ercc1P07903 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc1P07903 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc1P07903 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc1P07903 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ercc1P07903 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC16.09■□□□□ 0.17
Ercc1P07903 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ercc1P07903 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Ercc1P07903 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Ercc1P07903 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Ercc1P07903 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc1P07903 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Ercc1P07903 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc1P07903 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc1P07903 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc1P07903 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ercc1P07903 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ercc1P07903 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ercc1P07903 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Ercc1P07903 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Ercc1P07903 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Ercc1P07903 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Ercc1P07903 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc1P07903 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc1P07903 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc1P07903 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.08■□□□□ 0.16
Ercc1P07903 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Ercc1P07903 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc1P07903 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc1P07903 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc1P07903 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.08■□□□□ 0.16
Ercc1P07903 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc1P07903 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc1P07903 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Ercc1P07903 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Ercc1P07903 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ercc1P07903 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ercc1P07903 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ercc1P07903 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ercc1P07903 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ercc1P07903 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Ercc1P07903 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.07■□□□□ 0.16
Ercc1P07903 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ercc1P07903 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ercc1P07903 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Ercc1P07903 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Ercc1P07903 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc1P07903 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc1P07903 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc1P07903 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc1P07903 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.06■□□□□ 0.16
Ercc1P07903 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.06■□□□□ 0.16
Ercc1P07903 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc1P07903 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc1P07903 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.06■□□□□ 0.16
Ercc1P07903 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc1P07903 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.06■□□□□ 0.16
Ercc1P07903 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc1P07903 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ercc1P07903 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc1P07903 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Ercc1P07903 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Ercc1P07903 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.05■□□□□ 0.16
Ercc1P07903 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms