Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.88■□□□□ 0.29
P04224 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04224 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04224 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.88■□□□□ 0.29
P04224 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04224 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04224 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04224 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04224 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC16.88■□□□□ 0.29
P04224 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
P04224 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P04224 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
P04224 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
P04224 Gm16464-201ENSMUST00000117815 1095 ntBASIC16.87■□□□□ 0.29
P04224 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
P04224 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.87■□□□□ 0.29
P04224 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
P04224 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
P04224 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P04224 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
P04224 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P04224 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P04224 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
P04224 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
P04224 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.86■□□□□ 0.29
P04224 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04224 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
P04224 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04224 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04224 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04224 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04224 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
P04224 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
P04224 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04224 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04224 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04224 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04224 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04224 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P04224 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
P04224 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
P04224 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
P04224 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.85■□□□□ 0.29
P04224 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
P04224 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.85■□□□□ 0.29
P04224 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
P04224 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
P04224 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
P04224 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.84■□□□□ 0.29
P04224 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
P04224 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
P04224 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
P04224 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
P04224 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
P04224 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.84■□□□□ 0.29
P04224 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
P04224 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
P04224 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
P04224 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
P04224 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
P04224 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
P04224 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
P04224 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
P04224 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
P04224 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
P04224 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
P04224 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P04224 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC16.83■□□□□ 0.28
P04224 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.83■□□□□ 0.28
P04224 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.83■□□□□ 0.28
P04224 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P04224 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P04224 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
P04224 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P04224 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P04224 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
P04224 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
P04224 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04224 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04224 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04224 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04224 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04224 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04224 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04224 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P04224 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04224 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC16.82■□□□□ 0.28
P04224 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
P04224 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04224 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04224 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04224 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04224 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
P04224 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
P04224 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
P04224 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04224 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04224 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.81■□□□□ 0.28
P04224 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P04224 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms