Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
P01734 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
P01734 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
P01734 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
P01734 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
P01734 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
P01734 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
P01734 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
P01734 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
P01734 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
P01734 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
P01734 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
P01734 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
P01734 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
P01734 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
P01734 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
P01734 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
P01734 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.01■□□□□ 0.95
P01734 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21■□□□□ 0.95
P01734 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21■□□□□ 0.95
P01734 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
P01734 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21■□□□□ 0.95
P01734 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21■□□□□ 0.95
P01734 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21■□□□□ 0.95
P01734 Gm10033-202ENSMUST00000211874 928 ntBASIC21■□□□□ 0.95
P01734 Gm18671-201ENSMUST00000214826 683 ntBASIC21■□□□□ 0.95
P01734 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
P01734 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
P01734 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
P01734 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
P01734 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
P01734 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
P01734 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
P01734 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.99■□□□□ 0.95
P01734 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.99■□□□□ 0.95
P01734 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
P01734 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
P01734 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
P01734 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
P01734 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
P01734 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
P01734 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
P01734 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
P01734 Gm42569-201ENSMUST00000200539 472 ntBASIC20.98■□□□□ 0.95
P01734 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
P01734 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
P01734 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
P01734 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P01734 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
P01734 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P01734 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
P01734 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
P01734 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
P01734 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.97■□□□□ 0.95
P01734 Gm13234-201ENSMUST00000120010 747 ntBASIC20.97■□□□□ 0.95
P01734 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
P01734 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.97■□□□□ 0.95
P01734 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
P01734 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.97■□□□□ 0.95
P01734 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
P01734 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
P01734 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
P01734 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P01734 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P01734 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.96■□□□□ 0.95
P01734 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.96■□□□□ 0.95
P01734 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
P01734 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
P01734 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.96■□□□□ 0.95
P01734 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
P01734 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
P01734 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P01734 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P01734 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC20.95■□□□□ 0.94
P01734 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
P01734 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
P01734 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
P01734 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
P01734 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
P01734 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
P01734 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
P01734 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
P01734 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
P01734 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
P01734 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
P01734 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
P01734 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
P01734 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
P01734 Gm38205-201ENSMUST00000192243 258 ntBASIC20.94■□□□□ 0.94
P01734 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
P01734 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
P01734 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.94■□□□□ 0.94
P01734 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
P01734 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
P01734 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.94■□□□□ 0.94
P01734 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
P01734 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
P01734 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
P01734 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
P01734 Gm10849-201ENSMUST00000100397 618 ntBASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms