Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ClppO88696 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ClppO88696 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ClppO88696 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ClppO88696 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ClppO88696 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ClppO88696 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ClppO88696 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ClppO88696 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ClppO88696 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ClppO88696 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
ClppO88696 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.69■□□□□ 0.58
ClppO88696 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ClppO88696 Gm10033-202ENSMUST00000211874 928 ntBASIC18.69■□□□□ 0.58
ClppO88696 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.69■□□□□ 0.58
ClppO88696 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ClppO88696 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ClppO88696 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ClppO88696 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ClppO88696 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
ClppO88696 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
ClppO88696 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ClppO88696 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.68■□□□□ 0.58
ClppO88696 Gm42778-201ENSMUST00000199644 553 ntBASIC18.68■□□□□ 0.58
ClppO88696 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ClppO88696 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ClppO88696 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ClppO88696 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ClppO88696 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ClppO88696 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ClppO88696 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ClppO88696 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ClppO88696 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ClppO88696 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ClppO88696 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.67■□□□□ 0.58
ClppO88696 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ClppO88696 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.67■□□□□ 0.58
ClppO88696 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ClppO88696 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.67■□□□□ 0.58
ClppO88696 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ClppO88696 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ClppO88696 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ClppO88696 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClppO88696 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClppO88696 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClppO88696 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.66■□□□□ 0.58
ClppO88696 AV356131-201ENSMUST00000206201 750 ntBASIC18.66■□□□□ 0.58
ClppO88696 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.66■□□□□ 0.58
ClppO88696 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClppO88696 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClppO88696 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
ClppO88696 Gm43548-201ENSMUST00000197139 2353 ntBASIC18.66■□□□□ 0.58
ClppO88696 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClppO88696 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClppO88696 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClppO88696 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClppO88696 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClppO88696 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ClppO88696 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.65■□□□□ 0.58
ClppO88696 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.65■□□□□ 0.58
ClppO88696 Gm27801-201ENSMUST00000184174 223 ntBASIC18.65■□□□□ 0.58
ClppO88696 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClppO88696 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClppO88696 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.65■□□□□ 0.58
ClppO88696 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClppO88696 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ClppO88696 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClppO88696 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClppO88696 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ClppO88696 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ClppO88696 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.64■□□□□ 0.57
ClppO88696 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ClppO88696 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ClppO88696 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ClppO88696 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClppO88696 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClppO88696 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ClppO88696 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClppO88696 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ClppO88696 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClppO88696 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClppO88696 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClppO88696 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClppO88696 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.63■□□□□ 0.57
ClppO88696 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ClppO88696 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.62■□□□□ 0.57
ClppO88696 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
ClppO88696 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClppO88696 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClppO88696 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ClppO88696 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
ClppO88696 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClppO88696 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClppO88696 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClppO88696 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClppO88696 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClppO88696 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClppO88696 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.62■□□□□ 0.57
ClppO88696 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
ClppO88696 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms