Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf17O88472 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf17O88472 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Tnfrsf17O88472 Mir1199-201ENSMUST00000117015 119 ntBASIC18■□□□□ 0.47
Tnfrsf17O88472 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18■□□□□ 0.47
Tnfrsf17O88472 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf17O88472 Gm21362-201ENSMUST00000194272 928 ntBASIC18■□□□□ 0.47
Tnfrsf17O88472 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf17O88472 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tnfrsf17O88472 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Tnfrsf17O88472 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18■□□□□ 0.47
Tnfrsf17O88472 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18■□□□□ 0.47
Tnfrsf17O88472 Dio3-201ENSMUST00000097228 1449 ntBASIC17.99■□□□□ 0.47
Tnfrsf17O88472 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf17O88472 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf17O88472 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Tnfrsf17O88472 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf17O88472 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf17O88472 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf17O88472 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf17O88472 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf17O88472 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf17O88472 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf17O88472 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf17O88472 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.99■□□□□ 0.47
Tnfrsf17O88472 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.99■□□□□ 0.47
Tnfrsf17O88472 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tnfrsf17O88472 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.98■□□□□ 0.47
Tnfrsf17O88472 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf17O88472 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf17O88472 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.98■□□□□ 0.47
Tnfrsf17O88472 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf17O88472 Gm10231-201ENSMUST00000181584 441 ntBASIC17.98■□□□□ 0.47
Tnfrsf17O88472 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf17O88472 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.98■□□□□ 0.47
Tnfrsf17O88472 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.98■□□□□ 0.47
Tnfrsf17O88472 Gm10175-202ENSMUST00000208752 441 ntBASIC17.98■□□□□ 0.47
Tnfrsf17O88472 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf17O88472 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf17O88472 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf17O88472 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf17O88472 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC17.98■□□□□ 0.47
Tnfrsf17O88472 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf17O88472 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf17O88472 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf17O88472 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Tnfrsf17O88472 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tnfrsf17O88472 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.98■□□□□ 0.47
Tnfrsf17O88472 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.98■□□□□ 0.47
Tnfrsf17O88472 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf17O88472 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf17O88472 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf17O88472 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf17O88472 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf17O88472 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf17O88472 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Tnfrsf17O88472 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf17O88472 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.97■□□□□ 0.47
Tnfrsf17O88472 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.97■□□□□ 0.47
Tnfrsf17O88472 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.97■□□□□ 0.47
Tnfrsf17O88472 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf17O88472 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Tnfrsf17O88472 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf17O88472 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf17O88472 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf17O88472 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tnfrsf17O88472 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfrsf17O88472 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
Tnfrsf17O88472 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
Tnfrsf17O88472 Gm18666-201ENSMUST00000190039 958 ntBASIC17.96■□□□□ 0.47
Tnfrsf17O88472 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.96■□□□□ 0.47
Tnfrsf17O88472 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfrsf17O88472 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tnfrsf17O88472 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.96■□□□□ 0.47
Tnfrsf17O88472 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.96■□□□□ 0.47
Tnfrsf17O88472 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Tnfrsf17O88472 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Tnfrsf17O88472 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf17O88472 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.95■□□□□ 0.46
Tnfrsf17O88472 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf17O88472 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf17O88472 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf17O88472 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.95■□□□□ 0.46
Tnfrsf17O88472 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf17O88472 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf17O88472 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf17O88472 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf17O88472 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.95■□□□□ 0.46
Tnfrsf17O88472 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
Tnfrsf17O88472 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf17O88472 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf17O88472 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf17O88472 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf17O88472 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf17O88472 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tnfrsf17O88472 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Tnfrsf17O88472 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf17O88472 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.94■□□□□ 0.46
Tnfrsf17O88472 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Tnfrsf17O88472 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms