Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ChkaO54804 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ChkaO54804 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ChkaO54804 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ChkaO54804 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ChkaO54804 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ChkaO54804 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
ChkaO54804 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.46■□□□□ 0.71
ChkaO54804 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.46■□□□□ 0.71
ChkaO54804 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ChkaO54804 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ChkaO54804 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ChkaO54804 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ChkaO54804 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ChkaO54804 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ChkaO54804 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ChkaO54804 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ChkaO54804 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ChkaO54804 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ChkaO54804 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ChkaO54804 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.45■□□□□ 0.7
ChkaO54804 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
ChkaO54804 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ChkaO54804 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ChkaO54804 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ChkaO54804 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ChkaO54804 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ChkaO54804 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ChkaO54804 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ChkaO54804 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.44■□□□□ 0.7
ChkaO54804 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
ChkaO54804 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ChkaO54804 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ChkaO54804 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
ChkaO54804 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ChkaO54804 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ChkaO54804 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ChkaO54804 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ChkaO54804 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.43■□□□□ 0.7
ChkaO54804 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.43■□□□□ 0.7
ChkaO54804 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ChkaO54804 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ChkaO54804 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.43■□□□□ 0.7
ChkaO54804 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ChkaO54804 Gm9847-201ENSMUST00000052528 599 ntBASIC19.43■□□□□ 0.7
ChkaO54804 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ChkaO54804 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ChkaO54804 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ChkaO54804 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ChkaO54804 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
ChkaO54804 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.42■□□□□ 0.7
ChkaO54804 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ChkaO54804 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.42■□□□□ 0.7
ChkaO54804 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ChkaO54804 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.42■□□□□ 0.7
ChkaO54804 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
ChkaO54804 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ChkaO54804 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ChkaO54804 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ChkaO54804 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ChkaO54804 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ChkaO54804 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ChkaO54804 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ChkaO54804 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ChkaO54804 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ChkaO54804 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ChkaO54804 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ChkaO54804 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
ChkaO54804 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
ChkaO54804 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ChkaO54804 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
ChkaO54804 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ChkaO54804 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ChkaO54804 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.4■□□□□ 0.7
ChkaO54804 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ChkaO54804 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ChkaO54804 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
ChkaO54804 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ChkaO54804 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ChkaO54804 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ChkaO54804 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ChkaO54804 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
ChkaO54804 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ChkaO54804 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ChkaO54804 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ChkaO54804 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
ChkaO54804 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
ChkaO54804 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
ChkaO54804 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ChkaO54804 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
ChkaO54804 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ChkaO54804 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ChkaO54804 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
ChkaO54804 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ChkaO54804 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ChkaO54804 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ChkaO54804 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ChkaO54804 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ChkaO54804 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ChkaO54804 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms