Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Matn3O35701 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Matn3O35701 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Matn3O35701 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Matn3O35701 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Matn3O35701 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Matn3O35701 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Matn3O35701 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Matn3O35701 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Matn3O35701 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Matn3O35701 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.49■□□□□ 0.39
Matn3O35701 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Matn3O35701 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Matn3O35701 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Matn3O35701 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Matn3O35701 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Matn3O35701 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Matn3O35701 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Matn3O35701 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Matn3O35701 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Matn3O35701 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Matn3O35701 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Matn3O35701 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Matn3O35701 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Matn3O35701 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Matn3O35701 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Matn3O35701 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Matn3O35701 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Matn3O35701 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Matn3O35701 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Matn3O35701 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Matn3O35701 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Matn3O35701 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Matn3O35701 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Matn3O35701 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Matn3O35701 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Matn3O35701 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Matn3O35701 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.47■□□□□ 0.39
Matn3O35701 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Matn3O35701 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.47■□□□□ 0.39
Matn3O35701 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Matn3O35701 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Matn3O35701 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Matn3O35701 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Matn3O35701 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Matn3O35701 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Matn3O35701 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Matn3O35701 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.46■□□□□ 0.39
Matn3O35701 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Matn3O35701 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Matn3O35701 Gm43566-201ENSMUST00000196851 808 ntBASIC17.46■□□□□ 0.39
Matn3O35701 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.46■□□□□ 0.39
Matn3O35701 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Matn3O35701 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Matn3O35701 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Matn3O35701 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Matn3O35701 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Matn3O35701 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Matn3O35701 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Matn3O35701 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Matn3O35701 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Matn3O35701 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Matn3O35701 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Matn3O35701 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Matn3O35701 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Matn3O35701 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Matn3O35701 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Matn3O35701 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Matn3O35701 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Matn3O35701 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Matn3O35701 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Matn3O35701 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.45■□□□□ 0.38
Matn3O35701 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Matn3O35701 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Matn3O35701 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Matn3O35701 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Matn3O35701 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Matn3O35701 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Matn3O35701 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Matn3O35701 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.44■□□□□ 0.38
Matn3O35701 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Matn3O35701 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.44■□□□□ 0.38
Matn3O35701 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.44■□□□□ 0.38
Matn3O35701 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Matn3O35701 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Matn3O35701 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Matn3O35701 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Matn3O35701 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Matn3O35701 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Matn3O35701 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Matn3O35701 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Matn3O35701 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Matn3O35701 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Matn3O35701 Gm45444-201ENSMUST00000211394 898 ntBASIC17.43■□□□□ 0.38
Matn3O35701 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Matn3O35701 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Matn3O35701 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Matn3O35701 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.43■□□□□ 0.38
Matn3O35701 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Matn3O35701 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms