Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Nr1i3O35627 BC021767-201ENSMUST00000126387 1716 ntBASIC20.74■□□□□ 0.91
Nr1i3O35627 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.74■□□□□ 0.91
Nr1i3O35627 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nr1i3O35627 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.74■□□□□ 0.91
Nr1i3O35627 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.74■□□□□ 0.91
Nr1i3O35627 Spcs1-204ENSMUST00000226782 949 ntBASIC20.74■□□□□ 0.91
Nr1i3O35627 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Nr1i3O35627 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nr1i3O35627 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nr1i3O35627 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nr1i3O35627 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nr1i3O35627 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nr1i3O35627 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nr1i3O35627 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nr1i3O35627 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nr1i3O35627 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nr1i3O35627 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nr1i3O35627 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nr1i3O35627 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nr1i3O35627 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nr1i3O35627 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nr1i3O35627 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Nr1i3O35627 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Nr1i3O35627 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nr1i3O35627 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nr1i3O35627 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.72■□□□□ 0.91
Nr1i3O35627 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nr1i3O35627 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Nr1i3O35627 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nr1i3O35627 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nr1i3O35627 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
Nr1i3O35627 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nr1i3O35627 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nr1i3O35627 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nr1i3O35627 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nr1i3O35627 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Nr1i3O35627 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nr1i3O35627 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Nr1i3O35627 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nr1i3O35627 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nr1i3O35627 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Nr1i3O35627 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.71■□□□□ 0.91
Nr1i3O35627 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nr1i3O35627 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.71■□□□□ 0.91
Nr1i3O35627 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.71■□□□□ 0.91
Nr1i3O35627 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nr1i3O35627 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nr1i3O35627 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Nr1i3O35627 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nr1i3O35627 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nr1i3O35627 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nr1i3O35627 Golph3-205ENSMUST00000228671 2842 ntBASIC20.71■□□□□ 0.91
Nr1i3O35627 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nr1i3O35627 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nr1i3O35627 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Nr1i3O35627 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Nr1i3O35627 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nr1i3O35627 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Nr1i3O35627 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nr1i3O35627 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nr1i3O35627 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nr1i3O35627 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nr1i3O35627 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
Nr1i3O35627 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nr1i3O35627 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nr1i3O35627 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nr1i3O35627 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nr1i3O35627 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nr1i3O35627 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nr1i3O35627 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nr1i3O35627 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nr1i3O35627 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nr1i3O35627 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.69■□□□□ 0.9
Nr1i3O35627 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.69■□□□□ 0.9
Nr1i3O35627 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Nr1i3O35627 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nr1i3O35627 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nr1i3O35627 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Nr1i3O35627 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nr1i3O35627 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nr1i3O35627 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nr1i3O35627 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Nr1i3O35627 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Nr1i3O35627 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1i3O35627 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC20.68■□□□□ 0.9
Nr1i3O35627 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1i3O35627 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1i3O35627 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1i3O35627 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.68■□□□□ 0.9
Nr1i3O35627 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1i3O35627 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1i3O35627 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Nr1i3O35627 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
Nr1i3O35627 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1i3O35627 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1i3O35627 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Nr1i3O35627 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1i3O35627 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nr1i3O35627 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms