Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc1a6O35544 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.99■□□□□ 0.63
Slc1a6O35544 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Slc1a6O35544 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc1a6O35544 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Slc1a6O35544 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Slc1a6O35544 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Slc1a6O35544 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Slc1a6O35544 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Slc1a6O35544 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Slc1a6O35544 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc1a6O35544 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc1a6O35544 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc1a6O35544 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc1a6O35544 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.98■□□□□ 0.63
Slc1a6O35544 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc1a6O35544 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc1a6O35544 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc1a6O35544 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc1a6O35544 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc1a6O35544 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc1a6O35544 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Slc1a6O35544 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.98■□□□□ 0.63
Slc1a6O35544 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc1a6O35544 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Slc1a6O35544 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.97■□□□□ 0.63
Slc1a6O35544 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Slc1a6O35544 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc1a6O35544 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc1a6O35544 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Slc1a6O35544 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Slc1a6O35544 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Slc1a6O35544 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc1a6O35544 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.97■□□□□ 0.63
Slc1a6O35544 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc1a6O35544 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc1a6O35544 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc1a6O35544 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc1a6O35544 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Slc1a6O35544 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc1a6O35544 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Slc1a6O35544 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc1a6O35544 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Slc1a6O35544 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc1a6O35544 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc1a6O35544 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Slc1a6O35544 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc1a6O35544 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.95■□□□□ 0.62
Slc1a6O35544 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.95■□□□□ 0.62
Slc1a6O35544 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.95■□□□□ 0.62
Slc1a6O35544 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc1a6O35544 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Slc1a6O35544 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc1a6O35544 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc1a6O35544 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc1a6O35544 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc1a6O35544 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Slc1a6O35544 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc1a6O35544 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc1a6O35544 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc1a6O35544 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc1a6O35544 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Slc1a6O35544 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Slc1a6O35544 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc1a6O35544 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc1a6O35544 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Slc1a6O35544 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc1a6O35544 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc1a6O35544 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Slc1a6O35544 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.93■□□□□ 0.62
Slc1a6O35544 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc1a6O35544 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc1a6O35544 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc1a6O35544 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Slc1a6O35544 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc1a6O35544 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc1a6O35544 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc1a6O35544 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc1a6O35544 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc1a6O35544 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc1a6O35544 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc1a6O35544 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.92■□□□□ 0.62
Slc1a6O35544 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Slc1a6O35544 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc1a6O35544 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.92■□□□□ 0.62
Slc1a6O35544 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc1a6O35544 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.92■□□□□ 0.62
Slc1a6O35544 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.92■□□□□ 0.62
Slc1a6O35544 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Slc1a6O35544 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.92■□□□□ 0.62
Slc1a6O35544 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Slc1a6O35544 Gm7417-201ENSMUST00000192950 473 ntBASIC18.92■□□□□ 0.62
Slc1a6O35544 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc1a6O35544 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc1a6O35544 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc1a6O35544 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc1a6O35544 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc1a6O35544 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Slc1a6O35544 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
Slc1a6O35544 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms