Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Alx4O35137 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC17.2■□□□□ 0.34
Alx4O35137 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Alx4O35137 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.2■□□□□ 0.34
Alx4O35137 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
Alx4O35137 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Alx4O35137 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Alx4O35137 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.2■□□□□ 0.34
Alx4O35137 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Alx4O35137 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Alx4O35137 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.19■□□□□ 0.34
Alx4O35137 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Alx4O35137 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Alx4O35137 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Alx4O35137 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Alx4O35137 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Alx4O35137 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Alx4O35137 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Alx4O35137 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.19■□□□□ 0.34
Alx4O35137 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Alx4O35137 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Alx4O35137 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Alx4O35137 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Alx4O35137 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Alx4O35137 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Alx4O35137 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Alx4O35137 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Alx4O35137 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Alx4O35137 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Alx4O35137 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Alx4O35137 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Alx4O35137 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Alx4O35137 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Alx4O35137 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Alx4O35137 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Alx4O35137 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alx4O35137 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alx4O35137 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alx4O35137 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Alx4O35137 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alx4O35137 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.17■□□□□ 0.34
Alx4O35137 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Alx4O35137 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alx4O35137 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alx4O35137 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alx4O35137 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.16■□□□□ 0.34
Alx4O35137 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alx4O35137 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alx4O35137 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Alx4O35137 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Alx4O35137 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Alx4O35137 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alx4O35137 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alx4O35137 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alx4O35137 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alx4O35137 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Alx4O35137 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.15■□□□□ 0.34
Alx4O35137 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Alx4O35137 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alx4O35137 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alx4O35137 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Alx4O35137 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.15■□□□□ 0.34
Alx4O35137 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alx4O35137 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alx4O35137 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alx4O35137 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alx4O35137 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alx4O35137 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.15■□□□□ 0.34
Alx4O35137 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Alx4O35137 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Alx4O35137 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Alx4O35137 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Alx4O35137 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Alx4O35137 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Alx4O35137 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.14■□□□□ 0.33
Alx4O35137 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.14■□□□□ 0.33
Alx4O35137 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Alx4O35137 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alx4O35137 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alx4O35137 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alx4O35137 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alx4O35137 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alx4O35137 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Alx4O35137 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Alx4O35137 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Alx4O35137 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Alx4O35137 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Alx4O35137 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Alx4O35137 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Alx4O35137 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Alx4O35137 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Alx4O35137 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Alx4O35137 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Alx4O35137 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Alx4O35137 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx4O35137 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx4O35137 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.11■□□□□ 0.33
Alx4O35137 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx4O35137 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Alx4O35137 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms