Protein–RNA interactions for Protein: O08665

Sema3a, Semaphorin-3A, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3aO08665 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sema3aO08665 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sema3aO08665 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sema3aO08665 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sema3aO08665 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sema3aO08665 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sema3aO08665 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sema3aO08665 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sema3aO08665 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sema3aO08665 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Sema3aO08665 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.5■□□□□ 0.71
Sema3aO08665 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Sema3aO08665 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.5■□□□□ 0.71
Sema3aO08665 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Sema3aO08665 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sema3aO08665 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sema3aO08665 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sema3aO08665 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sema3aO08665 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sema3aO08665 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sema3aO08665 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sema3aO08665 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Sema3aO08665 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sema3aO08665 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.48■□□□□ 0.71
Sema3aO08665 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sema3aO08665 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sema3aO08665 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Sema3aO08665 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.48■□□□□ 0.71
Sema3aO08665 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Sema3aO08665 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sema3aO08665 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sema3aO08665 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sema3aO08665 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sema3aO08665 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Sema3aO08665 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sema3aO08665 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sema3aO08665 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sema3aO08665 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sema3aO08665 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Sema3aO08665 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sema3aO08665 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
Sema3aO08665 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sema3aO08665 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sema3aO08665 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sema3aO08665 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sema3aO08665 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sema3aO08665 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Sema3aO08665 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sema3aO08665 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sema3aO08665 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.46■□□□□ 0.71
Sema3aO08665 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sema3aO08665 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sema3aO08665 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sema3aO08665 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sema3aO08665 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.45■□□□□ 0.7
Sema3aO08665 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.45■□□□□ 0.7
Sema3aO08665 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.45■□□□□ 0.7
Sema3aO08665 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sema3aO08665 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sema3aO08665 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sema3aO08665 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema3aO08665 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema3aO08665 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sema3aO08665 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.44■□□□□ 0.7
Sema3aO08665 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.44■□□□□ 0.7
Sema3aO08665 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema3aO08665 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema3aO08665 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema3aO08665 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.44■□□□□ 0.7
Sema3aO08665 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema3aO08665 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema3aO08665 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema3aO08665 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sema3aO08665 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema3aO08665 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sema3aO08665 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sema3aO08665 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sema3aO08665 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sema3aO08665 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Sema3aO08665 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sema3aO08665 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sema3aO08665 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sema3aO08665 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Sema3aO08665 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sema3aO08665 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sema3aO08665 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Sema3aO08665 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sema3aO08665 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sema3aO08665 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.42■□□□□ 0.7
Sema3aO08665 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
Sema3aO08665 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sema3aO08665 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sema3aO08665 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Sema3aO08665 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sema3aO08665 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sema3aO08665 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sema3aO08665 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sema3aO08665 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Sema3aO08665 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sema3aO08665 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms