Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Raet1aO08602 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Raet1aO08602 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Raet1aO08602 Smad6-203ENSMUST00000179458 273 ntBASIC17.07■□□□□ 0.32
Raet1aO08602 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.07■□□□□ 0.32
Raet1aO08602 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.07■□□□□ 0.32
Raet1aO08602 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Raet1aO08602 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Raet1aO08602 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Raet1aO08602 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.07■□□□□ 0.32
Raet1aO08602 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Raet1aO08602 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Raet1aO08602 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Raet1aO08602 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Raet1aO08602 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1aO08602 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1aO08602 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1aO08602 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1aO08602 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Raet1aO08602 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1aO08602 Gm6139-201ENSMUST00000079261 882 ntBASIC17.06■□□□□ 0.32
Raet1aO08602 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1aO08602 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Raet1aO08602 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1aO08602 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC17.05■□□□□ 0.32
Raet1aO08602 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1aO08602 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.05■□□□□ 0.32
Raet1aO08602 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1aO08602 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1aO08602 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1aO08602 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1aO08602 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1aO08602 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1aO08602 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.05■□□□□ 0.32
Raet1aO08602 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1aO08602 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1aO08602 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1aO08602 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Raet1aO08602 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Raet1aO08602 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Raet1aO08602 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Raet1aO08602 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Raet1aO08602 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Raet1aO08602 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.04■□□□□ 0.32
Raet1aO08602 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.04■□□□□ 0.32
Raet1aO08602 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Raet1aO08602 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Raet1aO08602 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Raet1aO08602 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Raet1aO08602 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Raet1aO08602 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Raet1aO08602 Gm11421-201ENSMUST00000122124 294 ntBASIC17.03■□□□□ 0.32
Raet1aO08602 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Raet1aO08602 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Raet1aO08602 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Raet1aO08602 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Raet1aO08602 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Raet1aO08602 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Raet1aO08602 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Raet1aO08602 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Raet1aO08602 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Raet1aO08602 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Raet1aO08602 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Raet1aO08602 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Raet1aO08602 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Raet1aO08602 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Raet1aO08602 Iqck-206ENSMUST00000208658 2891 ntBASIC17.02■□□□□ 0.32
Raet1aO08602 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Raet1aO08602 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Raet1aO08602 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.02■□□□□ 0.32
Raet1aO08602 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Raet1aO08602 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Raet1aO08602 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Raet1aO08602 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Raet1aO08602 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Raet1aO08602 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Raet1aO08602 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.02■□□□□ 0.31
Raet1aO08602 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Raet1aO08602 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1aO08602 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1aO08602 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1aO08602 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1aO08602 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Raet1aO08602 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1aO08602 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Raet1aO08602 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.01■□□□□ 0.31
Raet1aO08602 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.01■□□□□ 0.31
Raet1aO08602 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1aO08602 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1aO08602 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1aO08602 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Raet1aO08602 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Raet1aO08602 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17■□□□□ 0.31
Raet1aO08602 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Raet1aO08602 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Raet1aO08602 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Raet1aO08602 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Raet1aO08602 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
Raet1aO08602 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17■□□□□ 0.31
Raet1aO08602 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms