Protein–RNA interactions for Protein: O08576

Rundc3a, RUN domain-containing protein 3A, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3aO08576 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.76■□□□□ 0.59
Rundc3aO08576 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rundc3aO08576 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rundc3aO08576 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.75■□□□□ 0.59
Rundc3aO08576 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rundc3aO08576 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rundc3aO08576 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rundc3aO08576 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rundc3aO08576 Serp2-204ENSMUST00000228055 705 ntBASIC18.75■□□□□ 0.59
Rundc3aO08576 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rundc3aO08576 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.75■□□□□ 0.59
Rundc3aO08576 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Rundc3aO08576 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rundc3aO08576 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rundc3aO08576 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rundc3aO08576 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Rundc3aO08576 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rundc3aO08576 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.74■□□□□ 0.59
Rundc3aO08576 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rundc3aO08576 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rundc3aO08576 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.74■□□□□ 0.59
Rundc3aO08576 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.74■□□□□ 0.59
Rundc3aO08576 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rundc3aO08576 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.74■□□□□ 0.59
Rundc3aO08576 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.74■□□□□ 0.59
Rundc3aO08576 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rundc3aO08576 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rundc3aO08576 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rundc3aO08576 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.73■□□□□ 0.59
Rundc3aO08576 Gm12922-201ENSMUST00000120626 809 ntBASIC18.73■□□□□ 0.59
Rundc3aO08576 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rundc3aO08576 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.73■□□□□ 0.59
Rundc3aO08576 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rundc3aO08576 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rundc3aO08576 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.73■□□□□ 0.59
Rundc3aO08576 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.73■□□□□ 0.59
Rundc3aO08576 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rundc3aO08576 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rundc3aO08576 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rundc3aO08576 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rundc3aO08576 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rundc3aO08576 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rundc3aO08576 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rundc3aO08576 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rundc3aO08576 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rundc3aO08576 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rundc3aO08576 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rundc3aO08576 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rundc3aO08576 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rundc3aO08576 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.72■□□□□ 0.59
Rundc3aO08576 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.71■□□□□ 0.59
Rundc3aO08576 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.71■□□□□ 0.59
Rundc3aO08576 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.71■□□□□ 0.59
Rundc3aO08576 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rundc3aO08576 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rundc3aO08576 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rundc3aO08576 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.71■□□□□ 0.59
Rundc3aO08576 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rundc3aO08576 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.71■□□□□ 0.58
Rundc3aO08576 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rundc3aO08576 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rundc3aO08576 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rundc3aO08576 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rundc3aO08576 BC021767-201ENSMUST00000126387 1716 ntBASIC18.7■□□□□ 0.58
Rundc3aO08576 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rundc3aO08576 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rundc3aO08576 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rundc3aO08576 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rundc3aO08576 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rundc3aO08576 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rundc3aO08576 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Rundc3aO08576 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rundc3aO08576 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rundc3aO08576 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rundc3aO08576 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rundc3aO08576 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Rundc3aO08576 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Rundc3aO08576 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rundc3aO08576 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Rundc3aO08576 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rundc3aO08576 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Rundc3aO08576 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
Rundc3aO08576 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.69■□□□□ 0.58
Rundc3aO08576 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rundc3aO08576 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.69■□□□□ 0.58
Rundc3aO08576 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rundc3aO08576 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rundc3aO08576 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rundc3aO08576 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rundc3aO08576 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rundc3aO08576 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rundc3aO08576 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Rundc3aO08576 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rundc3aO08576 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.68■□□□□ 0.58
Rundc3aO08576 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rundc3aO08576 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Rundc3aO08576 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rundc3aO08576 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Rundc3aO08576 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Rundc3aO08576 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms