Protein–RNA interactions for Protein: L7N2C0

Gm6401, Predicted gene 6401 (Fragment), mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6401L7N2C0 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm6401L7N2C0 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Gm6401L7N2C0 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm6401L7N2C0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm6401L7N2C0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm6401L7N2C0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm6401L7N2C0 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.14■□□□□ 0.33
Gm6401L7N2C0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Gm6401L7N2C0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.14■□□□□ 0.33
Gm6401L7N2C0 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm6401L7N2C0 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm6401L7N2C0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm6401L7N2C0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm6401L7N2C0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm6401L7N2C0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Gm6401L7N2C0 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm6401L7N2C0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm6401L7N2C0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm6401L7N2C0 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm6401L7N2C0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Gm6401L7N2C0 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.13■□□□□ 0.33
Gm6401L7N2C0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm6401L7N2C0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm6401L7N2C0 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Gm6401L7N2C0 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm6401L7N2C0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm6401L7N2C0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm6401L7N2C0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm6401L7N2C0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm6401L7N2C0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm6401L7N2C0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm6401L7N2C0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm6401L7N2C0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm6401L7N2C0 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm6401L7N2C0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm6401L7N2C0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm6401L7N2C0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm6401L7N2C0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm6401L7N2C0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Gm6401L7N2C0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm6401L7N2C0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm6401L7N2C0 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm6401L7N2C0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Gm6401L7N2C0 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm6401L7N2C0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm6401L7N2C0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.11■□□□□ 0.33
Gm6401L7N2C0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm6401L7N2C0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.11■□□□□ 0.33
Gm6401L7N2C0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm6401L7N2C0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm6401L7N2C0 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm6401L7N2C0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm6401L7N2C0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm6401L7N2C0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm6401L7N2C0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm6401L7N2C0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm6401L7N2C0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm6401L7N2C0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm6401L7N2C0 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm6401L7N2C0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm6401L7N2C0 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm6401L7N2C0 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm6401L7N2C0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.1■□□□□ 0.33
Gm6401L7N2C0 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm6401L7N2C0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gm6401L7N2C0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm6401L7N2C0 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm6401L7N2C0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm6401L7N2C0 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm6401L7N2C0 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm6401L7N2C0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm6401L7N2C0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Gm6401L7N2C0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm6401L7N2C0 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm6401L7N2C0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm6401L7N2C0 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.09■□□□□ 0.33
Gm6401L7N2C0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm6401L7N2C0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm6401L7N2C0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm6401L7N2C0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm6401L7N2C0 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm6401L7N2C0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm6401L7N2C0 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm6401L7N2C0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm6401L7N2C0 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm6401L7N2C0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm6401L7N2C0 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Gm6401L7N2C0 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm6401L7N2C0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm6401L7N2C0 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm6401L7N2C0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Gm6401L7N2C0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Gm6401L7N2C0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm6401L7N2C0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm6401L7N2C0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm6401L7N2C0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.08■□□□□ 0.32
Gm6401L7N2C0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Gm6401L7N2C0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Gm6401L7N2C0 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Gm6401L7N2C0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms