Protein–RNA interactions for Protein: H3BKP8

9930021J03Rik, RIKEN cDNA 9930021J03 gene, mousemouse

Predictions only

Length 2,027 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9930021J03RikH3BKP8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
9930021J03RikH3BKP8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
9930021J03RikH3BKP8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
9930021J03RikH3BKP8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
9930021J03RikH3BKP8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
9930021J03RikH3BKP8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
9930021J03RikH3BKP8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
9930021J03RikH3BKP8 Gm9988-201ENSMUST00000069786 435 ntBASIC18.02■□□□□ 0.48
9930021J03RikH3BKP8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
9930021J03RikH3BKP8 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
9930021J03RikH3BKP8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
9930021J03RikH3BKP8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
9930021J03RikH3BKP8 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
9930021J03RikH3BKP8 Gm10033-202ENSMUST00000211874 928 ntBASIC18.01■□□□□ 0.47
9930021J03RikH3BKP8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
9930021J03RikH3BKP8 Gm5874-201ENSMUST00000096101 508 ntBASIC18.01■□□□□ 0.47
9930021J03RikH3BKP8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
9930021J03RikH3BKP8 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.01■□□□□ 0.47
9930021J03RikH3BKP8 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
9930021J03RikH3BKP8 Reep4-203ENSMUST00000226563 1444 ntBASIC18.01■□□□□ 0.47
9930021J03RikH3BKP8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.01■□□□□ 0.47
9930021J03RikH3BKP8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.01■□□□□ 0.47
9930021J03RikH3BKP8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18■□□□□ 0.47
9930021J03RikH3BKP8 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
9930021J03RikH3BKP8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
9930021J03RikH3BKP8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
9930021J03RikH3BKP8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
9930021J03RikH3BKP8 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18■□□□□ 0.47
9930021J03RikH3BKP8 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
9930021J03RikH3BKP8 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18■□□□□ 0.47
9930021J03RikH3BKP8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
9930021J03RikH3BKP8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
9930021J03RikH3BKP8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
9930021J03RikH3BKP8 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
9930021J03RikH3BKP8 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
9930021J03RikH3BKP8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.99■□□□□ 0.47
9930021J03RikH3BKP8 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.99■□□□□ 0.47
9930021J03RikH3BKP8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
9930021J03RikH3BKP8 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
9930021J03RikH3BKP8 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
9930021J03RikH3BKP8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.99■□□□□ 0.47
9930021J03RikH3BKP8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
9930021J03RikH3BKP8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
9930021J03RikH3BKP8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
9930021J03RikH3BKP8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
9930021J03RikH3BKP8 Notumos-201ENSMUST00000151998 2659 ntBASIC17.99■□□□□ 0.47
9930021J03RikH3BKP8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
9930021J03RikH3BKP8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
9930021J03RikH3BKP8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
9930021J03RikH3BKP8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
9930021J03RikH3BKP8 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
9930021J03RikH3BKP8 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
9930021J03RikH3BKP8 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
9930021J03RikH3BKP8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
9930021J03RikH3BKP8 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.98■□□□□ 0.47
9930021J03RikH3BKP8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.98■□□□□ 0.47
9930021J03RikH3BKP8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
9930021J03RikH3BKP8 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.98■□□□□ 0.47
9930021J03RikH3BKP8 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
9930021J03RikH3BKP8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
9930021J03RikH3BKP8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
9930021J03RikH3BKP8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
9930021J03RikH3BKP8 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
9930021J03RikH3BKP8 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
9930021J03RikH3BKP8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.98■□□□□ 0.47
9930021J03RikH3BKP8 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
9930021J03RikH3BKP8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
9930021J03RikH3BKP8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
9930021J03RikH3BKP8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
9930021J03RikH3BKP8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
9930021J03RikH3BKP8 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
9930021J03RikH3BKP8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
9930021J03RikH3BKP8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
9930021J03RikH3BKP8 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
9930021J03RikH3BKP8 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.97■□□□□ 0.47
9930021J03RikH3BKP8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
9930021J03RikH3BKP8 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.97■□□□□ 0.47
9930021J03RikH3BKP8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
9930021J03RikH3BKP8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
9930021J03RikH3BKP8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
9930021J03RikH3BKP8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
9930021J03RikH3BKP8 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.96■□□□□ 0.47
9930021J03RikH3BKP8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
9930021J03RikH3BKP8 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
9930021J03RikH3BKP8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
9930021J03RikH3BKP8 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
9930021J03RikH3BKP8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
9930021J03RikH3BKP8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
9930021J03RikH3BKP8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
9930021J03RikH3BKP8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.96■□□□□ 0.47
9930021J03RikH3BKP8 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
9930021J03RikH3BKP8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
9930021J03RikH3BKP8 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.95■□□□□ 0.46
9930021J03RikH3BKP8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
9930021J03RikH3BKP8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
9930021J03RikH3BKP8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
9930021J03RikH3BKP8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
9930021J03RikH3BKP8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
9930021J03RikH3BKP8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.95■□□□□ 0.46
9930021J03RikH3BKP8 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms