Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Trim55G3X8Y1 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.78■□□□□ 0.76
Trim55G3X8Y1 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Trim55G3X8Y1 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim55G3X8Y1 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.78■□□□□ 0.76
Trim55G3X8Y1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim55G3X8Y1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim55G3X8Y1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trim55G3X8Y1 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim55G3X8Y1 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.78■□□□□ 0.76
Trim55G3X8Y1 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim55G3X8Y1 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim55G3X8Y1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim55G3X8Y1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trim55G3X8Y1 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC19.77■□□□□ 0.76
Trim55G3X8Y1 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim55G3X8Y1 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim55G3X8Y1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Trim55G3X8Y1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim55G3X8Y1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.77■□□□□ 0.76
Trim55G3X8Y1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.77■□□□□ 0.76
Trim55G3X8Y1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trim55G3X8Y1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC19.76■□□□□ 0.75
Trim55G3X8Y1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Trim55G3X8Y1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim55G3X8Y1 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.76■□□□□ 0.75
Trim55G3X8Y1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim55G3X8Y1 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim55G3X8Y1 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trim55G3X8Y1 Scarna2-201ENSMUST00000157560 414 ntBASIC19.76■□□□□ 0.75
Trim55G3X8Y1 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.76■□□□□ 0.75
Trim55G3X8Y1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC19.76■□□□□ 0.75
Trim55G3X8Y1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Trim55G3X8Y1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.75■□□□□ 0.75
Trim55G3X8Y1 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim55G3X8Y1 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim55G3X8Y1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim55G3X8Y1 Gm44428-201ENSMUST00000204474 874 ntBASIC19.75■□□□□ 0.75
Trim55G3X8Y1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim55G3X8Y1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Trim55G3X8Y1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
Trim55G3X8Y1 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trim55G3X8Y1 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim55G3X8Y1 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim55G3X8Y1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim55G3X8Y1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim55G3X8Y1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim55G3X8Y1 Fst-202ENSMUST00000223640 2612 ntBASIC19.74■□□□□ 0.75
Trim55G3X8Y1 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Trim55G3X8Y1 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trim55G3X8Y1 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim55G3X8Y1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trim55G3X8Y1 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim55G3X8Y1 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim55G3X8Y1 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim55G3X8Y1 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim55G3X8Y1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trim55G3X8Y1 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Trim55G3X8Y1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.73■□□□□ 0.75
Trim55G3X8Y1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim55G3X8Y1 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trim55G3X8Y1 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.72■□□□□ 0.75
Trim55G3X8Y1 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim55G3X8Y1 Pkd1-207ENSMUST00000228550 1050 ntBASIC19.72■□□□□ 0.75
Trim55G3X8Y1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim55G3X8Y1 Gm9806-201ENSMUST00000051080 552 ntBASIC19.72■□□□□ 0.75
Trim55G3X8Y1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim55G3X8Y1 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim55G3X8Y1 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim55G3X8Y1 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trim55G3X8Y1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim55G3X8Y1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim55G3X8Y1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim55G3X8Y1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim55G3X8Y1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim55G3X8Y1 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim55G3X8Y1 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trim55G3X8Y1 Gm11687-201ENSMUST00000118911 886 ntBASIC19.71■□□□□ 0.75
Trim55G3X8Y1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trim55G3X8Y1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trim55G3X8Y1 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Trim55G3X8Y1 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim55G3X8Y1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.7■□□□□ 0.74
Trim55G3X8Y1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim55G3X8Y1 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC19.7■□□□□ 0.74
Trim55G3X8Y1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trim55G3X8Y1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trim55G3X8Y1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim55G3X8Y1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trim55G3X8Y1 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Trim55G3X8Y1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim55G3X8Y1 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Trim55G3X8Y1 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim55G3X8Y1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim55G3X8Y1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trim55G3X8Y1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim55G3X8Y1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trim55G3X8Y1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC19.69■□□□□ 0.74
Trim55G3X8Y1 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Trim55G3X8Y1 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms