Protein–RNA interactions for Protein: A6X942

Sh2d4b, SH2 domain-containing protein 4B, mousemouse

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4bA6X942 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2d4bA6X942 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2d4bA6X942 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2d4bA6X942 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2d4bA6X942 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2d4bA6X942 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2d4bA6X942 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2d4bA6X942 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
Sh2d4bA6X942 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Sh2d4bA6X942 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.59■□□□□ 0.89
Sh2d4bA6X942 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.59■□□□□ 0.89
Sh2d4bA6X942 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.59■□□□□ 0.89
Sh2d4bA6X942 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.59■□□□□ 0.89
Sh2d4bA6X942 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2d4bA6X942 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.59■□□□□ 0.89
Sh2d4bA6X942 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2d4bA6X942 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2d4bA6X942 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2d4bA6X942 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh2d4bA6X942 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Sh2d4bA6X942 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Sh2d4bA6X942 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh2d4bA6X942 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Sh2d4bA6X942 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sh2d4bA6X942 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sh2d4bA6X942 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Sh2d4bA6X942 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sh2d4bA6X942 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sh2d4bA6X942 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.57■□□□□ 0.88
Sh2d4bA6X942 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh2d4bA6X942 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh2d4bA6X942 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.57■□□□□ 0.88
Sh2d4bA6X942 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh2d4bA6X942 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh2d4bA6X942 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh2d4bA6X942 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh2d4bA6X942 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.56■□□□□ 0.88
Sh2d4bA6X942 Gm10653-202ENSMUST00000139570 835 ntBASIC20.56■□□□□ 0.88
Sh2d4bA6X942 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sh2d4bA6X942 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh2d4bA6X942 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh2d4bA6X942 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh2d4bA6X942 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh2d4bA6X942 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.55■□□□□ 0.88
Sh2d4bA6X942 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh2d4bA6X942 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh2d4bA6X942 Mir5133-201ENSMUST00000174955 77 ntBASIC20.55■□□□□ 0.88
Sh2d4bA6X942 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sh2d4bA6X942 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh2d4bA6X942 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sh2d4bA6X942 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh2d4bA6X942 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh2d4bA6X942 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.54■□□□□ 0.88
Sh2d4bA6X942 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh2d4bA6X942 Reep4-203ENSMUST00000226563 1444 ntBASIC20.54■□□□□ 0.88
Sh2d4bA6X942 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sh2d4bA6X942 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh2d4bA6X942 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh2d4bA6X942 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh2d4bA6X942 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh2d4bA6X942 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Sh2d4bA6X942 Gm20760-201ENSMUST00000179197 648 ntBASIC20.54■□□□□ 0.88
Sh2d4bA6X942 Gm7514-201ENSMUST00000209475 934 ntBASIC20.54■□□□□ 0.88
Sh2d4bA6X942 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh2d4bA6X942 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh2d4bA6X942 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh2d4bA6X942 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh2d4bA6X942 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh2d4bA6X942 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Sh2d4bA6X942 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.53■□□□□ 0.88
Sh2d4bA6X942 Gm22240-201ENSMUST00000175225 82 ntBASIC20.53■□□□□ 0.88
Sh2d4bA6X942 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Sh2d4bA6X942 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh2d4bA6X942 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh2d4bA6X942 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh2d4bA6X942 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sh2d4bA6X942 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Sh2d4bA6X942 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.52■□□□□ 0.88
Sh2d4bA6X942 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Sh2d4bA6X942 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh2d4bA6X942 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Sh2d4bA6X942 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh2d4bA6X942 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.52■□□□□ 0.88
Sh2d4bA6X942 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Sh2d4bA6X942 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC20.52■□□□□ 0.88
Sh2d4bA6X942 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
Sh2d4bA6X942 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh2d4bA6X942 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh2d4bA6X942 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh2d4bA6X942 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.51■□□□□ 0.87
Sh2d4bA6X942 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh2d4bA6X942 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.51■□□□□ 0.87
Sh2d4bA6X942 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh2d4bA6X942 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sh2d4bA6X942 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh2d4bA6X942 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh2d4bA6X942 Iqck-206ENSMUST00000208658 2891 ntBASIC20.5■□□□□ 0.87
Sh2d4bA6X942 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh2d4bA6X942 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh2d4bA6X942 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms