Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav12d-1A0N8R0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Trav12d-1A0N8R0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav12d-1A0N8R0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav12d-1A0N8R0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12d-1A0N8R0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12d-1A0N8R0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12d-1A0N8R0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12d-1A0N8R0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12d-1A0N8R0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC15.51■□□□□ 0.07
Trav12d-1A0N8R0 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12d-1A0N8R0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Trav12d-1A0N8R0 Gm7417-201ENSMUST00000192950 473 ntBASIC15.51■□□□□ 0.07
Trav12d-1A0N8R0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12d-1A0N8R0 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.51■□□□□ 0.07
Trav12d-1A0N8R0 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.51■□□□□ 0.07
Trav12d-1A0N8R0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav12d-1A0N8R0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav12d-1A0N8R0 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12d-1A0N8R0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12d-1A0N8R0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12d-1A0N8R0 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12d-1A0N8R0 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12d-1A0N8R0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav12d-1A0N8R0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12d-1A0N8R0 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12d-1A0N8R0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12d-1A0N8R0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav12d-1A0N8R0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12d-1A0N8R0 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12d-1A0N8R0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12d-1A0N8R0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12d-1A0N8R0 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12d-1A0N8R0 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav12d-1A0N8R0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12d-1A0N8R0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav12d-1A0N8R0 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12d-1A0N8R0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12d-1A0N8R0 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Trav12d-1A0N8R0 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.49■□□□□ 0.07
Trav12d-1A0N8R0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12d-1A0N8R0 Gm42501-201ENSMUST00000200220 1026 ntBASIC15.49■□□□□ 0.07
Trav12d-1A0N8R0 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12d-1A0N8R0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12d-1A0N8R0 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav12d-1A0N8R0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Trav12d-1A0N8R0 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12d-1A0N8R0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trav12d-1A0N8R0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav12d-1A0N8R0 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Trav12d-1A0N8R0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-1A0N8R0 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-1A0N8R0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-1A0N8R0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trav12d-1A0N8R0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav12d-1A0N8R0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trav12d-1A0N8R0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-1A0N8R0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-1A0N8R0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-1A0N8R0 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-1A0N8R0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Trav12d-1A0N8R0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-1A0N8R0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav12d-1A0N8R0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-1A0N8R0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
Trav12d-1A0N8R0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-1A0N8R0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-1A0N8R0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trav12d-1A0N8R0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-1A0N8R0 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-1A0N8R0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav12d-1A0N8R0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav12d-1A0N8R0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav12d-1A0N8R0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav12d-1A0N8R0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav12d-1A0N8R0 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trav12d-1A0N8R0 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav12d-1A0N8R0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav12d-1A0N8R0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC15.47■□□□□ 0.07
Trav12d-1A0N8R0 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.46■□□□□ 0.07
Trav12d-1A0N8R0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav12d-1A0N8R0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav12d-1A0N8R0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav12d-1A0N8R0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav12d-1A0N8R0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav12d-1A0N8R0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav12d-1A0N8R0 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.46■□□□□ 0.07
Trav12d-1A0N8R0 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav12d-1A0N8R0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav12d-1A0N8R0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav12d-1A0N8R0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav12d-1A0N8R0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12d-1A0N8R0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12d-1A0N8R0 Gm37352-201ENSMUST00000193908 2181 ntBASIC15.45■□□□□ 0.06
Trav12d-1A0N8R0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12d-1A0N8R0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12d-1A0N8R0 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav12d-1A0N8R0 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Trav12d-1A0N8R0 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav12d-1A0N8R0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms