Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.17□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv2-1A0A0G2JGB9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv2-1A0A0G2JGB9 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.15□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC14.15□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC14.15□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC14.15□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC14.15□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trdv2-1A0A0G2JGB9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.14□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.14□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.14□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.13□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC14.13□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.11□□□□□ -0.15
Trdv2-1A0A0G2JGB9 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trdv2-1A0A0G2JGB9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC14.11□□□□□ -0.15
Trdv2-1A0A0G2JGB9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms