Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Trav13n-4A0A0G2JG01 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Trav13n-4A0A0G2JG01 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Trav13n-4A0A0G2JG01 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13n-4A0A0G2JG01 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13n-4A0A0G2JG01 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13n-4A0A0G2JG01 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13n-4A0A0G2JG01 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13n-4A0A0G2JG01 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13n-4A0A0G2JG01 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13n-4A0A0G2JG01 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13n-4A0A0G2JG01 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13n-4A0A0G2JG01 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13n-4A0A0G2JG01 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Trav13n-4A0A0G2JG01 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13n-4A0A0G2JG01 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13n-4A0A0G2JG01 Dapk1-207ENSMUST00000226059 5009 ntBASIC15.57■□□□□ 0.08
Trav13n-4A0A0G2JG01 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13n-4A0A0G2JG01 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13n-4A0A0G2JG01 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Trav13n-4A0A0G2JG01 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trav13n-4A0A0G2JG01 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13n-4A0A0G2JG01 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13n-4A0A0G2JG01 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.57■□□□□ 0.08
Trav13n-4A0A0G2JG01 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13n-4A0A0G2JG01 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13n-4A0A0G2JG01 Gm43173-201ENSMUST00000202246 593 ntBASIC15.57■□□□□ 0.08
Trav13n-4A0A0G2JG01 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.57■□□□□ 0.08
Trav13n-4A0A0G2JG01 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13n-4A0A0G2JG01 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13n-4A0A0G2JG01 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13n-4A0A0G2JG01 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13n-4A0A0G2JG01 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.57■□□□□ 0.08
Trav13n-4A0A0G2JG01 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13n-4A0A0G2JG01 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13n-4A0A0G2JG01 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13n-4A0A0G2JG01 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav13n-4A0A0G2JG01 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13n-4A0A0G2JG01 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13n-4A0A0G2JG01 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Trav13n-4A0A0G2JG01 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13n-4A0A0G2JG01 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Trav13n-4A0A0G2JG01 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13n-4A0A0G2JG01 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.56■□□□□ 0.08
Trav13n-4A0A0G2JG01 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13n-4A0A0G2JG01 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13n-4A0A0G2JG01 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.56■□□□□ 0.08
Trav13n-4A0A0G2JG01 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Trav13n-4A0A0G2JG01 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13n-4A0A0G2JG01 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav13n-4A0A0G2JG01 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13n-4A0A0G2JG01 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13n-4A0A0G2JG01 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav13n-4A0A0G2JG01 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13n-4A0A0G2JG01 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13n-4A0A0G2JG01 Gm26833-201ENSMUST00000180899 440 ntBASIC15.55■□□□□ 0.08
Trav13n-4A0A0G2JG01 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13n-4A0A0G2JG01 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13n-4A0A0G2JG01 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13n-4A0A0G2JG01 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13n-4A0A0G2JG01 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13n-4A0A0G2JG01 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13n-4A0A0G2JG01 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 AC166356.1-201ENSMUST00000228236 1426 ntBASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Gm12251-201ENSMUST00000117893 792 ntBASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13n-4A0A0G2JG01 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav13n-4A0A0G2JG01 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13n-4A0A0G2JG01 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13n-4A0A0G2JG01 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav13n-4A0A0G2JG01 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav13n-4A0A0G2JG01 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Trav13n-4A0A0G2JG01 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav13n-4A0A0G2JG01 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13n-4A0A0G2JG01 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13n-4A0A0G2JG01 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13n-4A0A0G2JG01 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13n-4A0A0G2JG01 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms