Protein–RNA interactions for Protein: A0A0B4J1J8

Tcrg-V4, T cell receptor gamma, variable 4 (Fragment), mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcrg-V4A0A0B4J1J8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC14.48□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC14.47□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Gm12818-201ENSMUST00000117562 1349 ntBASIC14.47□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC14.47□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.47□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.46□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.46□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC14.46□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.46□□□□□ -0.09
Tcrg-V4A0A0B4J1J8 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.46□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.45□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC14.44□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Mir3960-201ENSMUST00000198213 73 ntBASIC14.44□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.44□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.43□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Gm42922-201ENSMUST00000195887 2078 ntBASIC14.42□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC14.42□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.42□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.42□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tcrg-V4A0A0B4J1J8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms