Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv19A0A0B4J1H4 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv19A0A0B4J1H4 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv19A0A0B4J1H4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv19A0A0B4J1H4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Trbv19A0A0B4J1H4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv19A0A0B4J1H4 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Trbv19A0A0B4J1H4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv19A0A0B4J1H4 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv19A0A0B4J1H4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv19A0A0B4J1H4 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv19A0A0B4J1H4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv19A0A0B4J1H4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trbv19A0A0B4J1H4 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv19A0A0B4J1H4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv19A0A0B4J1H4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Trbv19A0A0B4J1H4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 Gm9847-201ENSMUST00000052528 599 ntBASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv19A0A0B4J1H4 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv19A0A0B4J1H4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv19A0A0B4J1H4 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv19A0A0B4J1H4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv19A0A0B4J1H4 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv19A0A0B4J1H4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Trbv19A0A0B4J1H4 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv19A0A0B4J1H4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv19A0A0B4J1H4 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trbv19A0A0B4J1H4 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv19A0A0B4J1H4 Serp2-204ENSMUST00000228055 705 ntBASIC15.42■□□□□ 0.06
Trbv19A0A0B4J1H4 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv19A0A0B4J1H4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv19A0A0B4J1H4 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv19A0A0B4J1H4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trbv19A0A0B4J1H4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trbv19A0A0B4J1H4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.41■□□□□ 0.06
Trbv19A0A0B4J1H4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv19A0A0B4J1H4 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv19A0A0B4J1H4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv19A0A0B4J1H4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trbv19A0A0B4J1H4 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv19A0A0B4J1H4 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Trbv19A0A0B4J1H4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.41■□□□□ 0.06
Trbv19A0A0B4J1H4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC15.41■□□□□ 0.06
Trbv19A0A0B4J1H4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.41■□□□□ 0.06
Trbv19A0A0B4J1H4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv19A0A0B4J1H4 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.41■□□□□ 0.06
Trbv19A0A0B4J1H4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv19A0A0B4J1H4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv19A0A0B4J1H4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv19A0A0B4J1H4 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv19A0A0B4J1H4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv19A0A0B4J1H4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.41■□□□□ 0.06
Trbv19A0A0B4J1H4 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv19A0A0B4J1H4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trbv19A0A0B4J1H4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.4■□□□□ 0.06
Trbv19A0A0B4J1H4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trbv19A0A0B4J1H4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv19A0A0B4J1H4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv19A0A0B4J1H4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv19A0A0B4J1H4 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv19A0A0B4J1H4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC15.4■□□□□ 0.06
Trbv19A0A0B4J1H4 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv19A0A0B4J1H4 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trbv19A0A0B4J1H4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv19A0A0B4J1H4 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trbv19A0A0B4J1H4 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv19A0A0B4J1H4 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv19A0A0B4J1H4 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv19A0A0B4J1H4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Trbv19A0A0B4J1H4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv19A0A0B4J1H4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv19A0A0B4J1H4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trbv19A0A0B4J1H4 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.39■□□□□ 0.05
Trbv19A0A0B4J1H4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms