Protein–RNA interactions for Protein: A0A087WP35

Gm28919, Predicted gene 28919, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28919A0A087WP35 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28919A0A087WP35 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Gm28919A0A087WP35 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28919A0A087WP35 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28919A0A087WP35 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28919A0A087WP35 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Gm28919A0A087WP35 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.53■□□□□ 0.88
Gm28919A0A087WP35 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28919A0A087WP35 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28919A0A087WP35 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28919A0A087WP35 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28919A0A087WP35 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28919A0A087WP35 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28919A0A087WP35 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Gm28919A0A087WP35 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Gm28919A0A087WP35 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Gm28919A0A087WP35 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm28919A0A087WP35 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm28919A0A087WP35 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm28919A0A087WP35 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm28919A0A087WP35 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Gm28919A0A087WP35 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.52■□□□□ 0.88
Gm28919A0A087WP35 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.52■□□□□ 0.88
Gm28919A0A087WP35 Gm9959-201ENSMUST00000068277 390 ntBASIC20.52■□□□□ 0.88
Gm28919A0A087WP35 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Gm28919A0A087WP35 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm28919A0A087WP35 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm28919A0A087WP35 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Gm28919A0A087WP35 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gm28919A0A087WP35 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
Gm28919A0A087WP35 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.52■□□□□ 0.87
Gm28919A0A087WP35 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Gm28919A0A087WP35 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28919A0A087WP35 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28919A0A087WP35 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28919A0A087WP35 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28919A0A087WP35 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28919A0A087WP35 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.51■□□□□ 0.87
Gm28919A0A087WP35 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28919A0A087WP35 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28919A0A087WP35 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28919A0A087WP35 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28919A0A087WP35 AA386476-201ENSMUST00000098781 1665 ntBASIC20.51■□□□□ 0.87
Gm28919A0A087WP35 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.51■□□□□ 0.87
Gm28919A0A087WP35 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28919A0A087WP35 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28919A0A087WP35 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28919A0A087WP35 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Gm28919A0A087WP35 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
Gm28919A0A087WP35 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
Gm28919A0A087WP35 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28919A0A087WP35 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28919A0A087WP35 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
Gm28919A0A087WP35 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.5■□□□□ 0.87
Gm28919A0A087WP35 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28919A0A087WP35 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28919A0A087WP35 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28919A0A087WP35 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.5■□□□□ 0.87
Gm28919A0A087WP35 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
Gm28919A0A087WP35 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Gm28919A0A087WP35 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.5■□□□□ 0.87
Gm28919A0A087WP35 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28919A0A087WP35 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC20.49■□□□□ 0.87
Gm28919A0A087WP35 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28919A0A087WP35 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Gm28919A0A087WP35 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28919A0A087WP35 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28919A0A087WP35 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.49■□□□□ 0.87
Gm28919A0A087WP35 Rps24-207ENSMUST00000224568 714 ntBASIC20.49■□□□□ 0.87
Gm28919A0A087WP35 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28919A0A087WP35 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28919A0A087WP35 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28919A0A087WP35 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28919A0A087WP35 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28919A0A087WP35 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28919A0A087WP35 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Gm28919A0A087WP35 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm28919A0A087WP35 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Gm28919A0A087WP35 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.48■□□□□ 0.87
Gm28919A0A087WP35 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Gm28919A0A087WP35 Gm9870-201ENSMUST00000063874 645 ntBASIC20.48■□□□□ 0.87
Gm28919A0A087WP35 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Gm28919A0A087WP35 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm28919A0A087WP35 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.48■□□□□ 0.87
Gm28919A0A087WP35 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm28919A0A087WP35 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Gm28919A0A087WP35 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm28919A0A087WP35 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Gm28919A0A087WP35 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28919A0A087WP35 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28919A0A087WP35 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28919A0A087WP35 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28919A0A087WP35 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28919A0A087WP35 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28919A0A087WP35 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Gm28919A0A087WP35 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gm28919A0A087WP35 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Gm28919A0A087WP35 BC021767-201ENSMUST00000126387 1716 ntBASIC20.47■□□□□ 0.87
Gm28919A0A087WP35 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Gm28919A0A087WP35 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms