Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6n-6A0A075B6B2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Trav6n-6A0A075B6B2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-6A0A075B6B2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-6A0A075B6B2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav6n-6A0A075B6B2 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-6A0A075B6B2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Trav6n-6A0A075B6B2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-6A0A075B6B2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav6n-6A0A075B6B2 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.32□□□□□ -0.12
Trav6n-6A0A075B6B2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-6A0A075B6B2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-6A0A075B6B2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav6n-6A0A075B6B2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-6A0A075B6B2 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-6A0A075B6B2 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav6n-6A0A075B6B2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-6A0A075B6B2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-6A0A075B6B2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Trav6n-6A0A075B6B2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-6A0A075B6B2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-6A0A075B6B2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6n-6A0A075B6B2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-6A0A075B6B2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.31□□□□□ -0.12
Trav6n-6A0A075B6B2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-6A0A075B6B2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.31□□□□□ -0.12
Trav6n-6A0A075B6B2 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-6A0A075B6B2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-6A0A075B6B2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
Trav6n-6A0A075B6B2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-6A0A075B6B2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-6A0A075B6B2 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-6A0A075B6B2 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6n-6A0A075B6B2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6n-6A0A075B6B2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6n-6A0A075B6B2 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6n-6A0A075B6B2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6n-6A0A075B6B2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav6n-6A0A075B6B2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6n-6A0A075B6B2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6n-6A0A075B6B2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6n-6A0A075B6B2 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6n-6A0A075B6B2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6n-6A0A075B6B2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6n-6A0A075B6B2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6n-6A0A075B6B2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6n-6A0A075B6B2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6n-6A0A075B6B2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6n-6A0A075B6B2 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-6A0A075B6B2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav6n-6A0A075B6B2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-6A0A075B6B2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav6n-6A0A075B6B2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-6A0A075B6B2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-6A0A075B6B2 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-6A0A075B6B2 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-6A0A075B6B2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-6A0A075B6B2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-6A0A075B6B2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-6A0A075B6B2 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav6n-6A0A075B6B2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-6A0A075B6B2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-6A0A075B6B2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-6A0A075B6B2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6n-6A0A075B6B2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
Trav6n-6A0A075B6B2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav6n-6A0A075B6B2 Gm5953-201ENSMUST00000220644 2616 ntBASIC14.28□□□□□ -0.12
Trav6n-6A0A075B6B2 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6n-6A0A075B6B2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6n-6A0A075B6B2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
Trav6n-6A0A075B6B2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav6n-6A0A075B6B2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav6n-6A0A075B6B2 Gm22238-201ENSMUST00000175222 88 ntBASIC14.28□□□□□ -0.12
Trav6n-6A0A075B6B2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC14.28□□□□□ -0.12
Trav6n-6A0A075B6B2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6n-6A0A075B6B2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6n-6A0A075B6B2 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6n-6A0A075B6B2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6n-6A0A075B6B2 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6n-6A0A075B6B2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav6n-6A0A075B6B2 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6n-6A0A075B6B2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6n-6A0A075B6B2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav6n-6A0A075B6B2 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Trav6n-6A0A075B6B2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6n-6A0A075B6B2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6n-6A0A075B6B2 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6n-6A0A075B6B2 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6n-6A0A075B6B2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6n-6A0A075B6B2 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav6n-6A0A075B6B2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.27□□□□□ -0.13
Trav6n-6A0A075B6B2 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav6n-6A0A075B6B2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Trav6n-6A0A075B6B2 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.27□□□□□ -0.13
Trav6n-6A0A075B6B2 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.27□□□□□ -0.13
Trav6n-6A0A075B6B2 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6n-6A0A075B6B2 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6n-6A0A075B6B2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6n-6A0A075B6B2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Trav6n-6A0A075B6B2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms