Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav16A0A075B653 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.88□□□□□ -0.03
Trav16A0A075B653 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav16A0A075B653 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav16A0A075B653 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav16A0A075B653 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav16A0A075B653 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC14.88□□□□□ -0.03
Trav16A0A075B653 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trav16A0A075B653 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav16A0A075B653 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav16A0A075B653 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav16A0A075B653 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav16A0A075B653 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav16A0A075B653 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav16A0A075B653 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav16A0A075B653 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav16A0A075B653 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Trav16A0A075B653 Grk6-206ENSMUST00000224995 2971 ntBASIC14.88□□□□□ -0.03
Trav16A0A075B653 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
Trav16A0A075B653 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16A0A075B653 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16A0A075B653 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16A0A075B653 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16A0A075B653 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16A0A075B653 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16A0A075B653 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav16A0A075B653 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav16A0A075B653 Mir6236-201ENSMUST00000184437 123 ntBASIC14.87□□□□□ -0.03
Trav16A0A075B653 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16A0A075B653 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16A0A075B653 Gm43231-201ENSMUST00000202960 2258 ntBASIC14.87□□□□□ -0.03
Trav16A0A075B653 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16A0A075B653 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16A0A075B653 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16A0A075B653 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16A0A075B653 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav16A0A075B653 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav16A0A075B653 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav16A0A075B653 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav16A0A075B653 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav16A0A075B653 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav16A0A075B653 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav16A0A075B653 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav16A0A075B653 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC14.86□□□□□ -0.03
Trav16A0A075B653 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav16A0A075B653 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trav16A0A075B653 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav16A0A075B653 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav16A0A075B653 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav16A0A075B653 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav16A0A075B653 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav16A0A075B653 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.85□□□□□ -0.03
Trav16A0A075B653 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav16A0A075B653 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav16A0A075B653 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav16A0A075B653 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav16A0A075B653 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav16A0A075B653 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav16A0A075B653 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav16A0A075B653 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav16A0A075B653 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav16A0A075B653 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav16A0A075B653 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav16A0A075B653 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav16A0A075B653 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC14.84□□□□□ -0.03
Trav16A0A075B653 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.84□□□□□ -0.03
Trav16A0A075B653 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav16A0A075B653 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav16A0A075B653 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.84□□□□□ -0.03
Trav16A0A075B653 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav16A0A075B653 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav16A0A075B653 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav16A0A075B653 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav16A0A075B653 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
Trav16A0A075B653 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav16A0A075B653 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav16A0A075B653 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav16A0A075B653 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.03
Trav16A0A075B653 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav16A0A075B653 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav16A0A075B653 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav16A0A075B653 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav16A0A075B653 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav16A0A075B653 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav16A0A075B653 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav16A0A075B653 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav16A0A075B653 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav16A0A075B653 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav16A0A075B653 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trav16A0A075B653 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav16A0A075B653 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav16A0A075B653 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav16A0A075B653 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav16A0A075B653 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav16A0A075B653 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav16A0A075B653 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav16A0A075B653 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav16A0A075B653 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav16A0A075B653 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav16A0A075B653 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms