Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav4d-3A0A075B625 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.31
Trav4d-3A0A075B625 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav4d-3A0A075B625 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Trav4d-3A0A075B625 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Trav4d-3A0A075B625 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav4d-3A0A075B625 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav4d-3A0A075B625 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.14□□□□□ -0.31
Trav4d-3A0A075B625 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav4d-3A0A075B625 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav4d-3A0A075B625 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav4d-3A0A075B625 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav4d-3A0A075B625 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav4d-3A0A075B625 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav4d-3A0A075B625 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav4d-3A0A075B625 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav4d-3A0A075B625 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav4d-3A0A075B625 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav4d-3A0A075B625 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav4d-3A0A075B625 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Trav4d-3A0A075B625 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav4d-3A0A075B625 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4d-3A0A075B625 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4d-3A0A075B625 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav4d-3A0A075B625 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4d-3A0A075B625 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4d-3A0A075B625 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4d-3A0A075B625 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4d-3A0A075B625 Gm11847-201ENSMUST00000125165 1119 ntBASIC13.12□□□□□ -0.31
Trav4d-3A0A075B625 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Trav4d-3A0A075B625 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4d-3A0A075B625 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4d-3A0A075B625 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4d-3A0A075B625 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4d-3A0A075B625 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4d-3A0A075B625 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4d-3A0A075B625 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav4d-3A0A075B625 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4d-3A0A075B625 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav4d-3A0A075B625 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4d-3A0A075B625 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4d-3A0A075B625 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4d-3A0A075B625 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4d-3A0A075B625 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4d-3A0A075B625 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trav4d-3A0A075B625 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4d-3A0A075B625 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4d-3A0A075B625 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4d-3A0A075B625 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4d-3A0A075B625 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4d-3A0A075B625 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4d-3A0A075B625 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav4d-3A0A075B625 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4d-3A0A075B625 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4d-3A0A075B625 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4d-3A0A075B625 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4d-3A0A075B625 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4d-3A0A075B625 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4d-3A0A075B625 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4d-3A0A075B625 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4d-3A0A075B625 Gm11599-201ENSMUST00000118720 878 ntBASIC13.1□□□□□ -0.31
Trav4d-3A0A075B625 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4d-3A0A075B625 Gm7432-201ENSMUST00000210343 879 ntBASIC13.1□□□□□ -0.31
Trav4d-3A0A075B625 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4d-3A0A075B625 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4d-3A0A075B625 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav4d-3A0A075B625 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4d-3A0A075B625 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4d-3A0A075B625 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4d-3A0A075B625 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav4d-3A0A075B625 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav4d-3A0A075B625 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4d-3A0A075B625 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav4d-3A0A075B625 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms