Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav7n-4A0A075B620 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7n-4A0A075B620 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7n-4A0A075B620 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7n-4A0A075B620 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7n-4A0A075B620 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav7n-4A0A075B620 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7n-4A0A075B620 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7n-4A0A075B620 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC14.62□□□□□ -0.07
Trav7n-4A0A075B620 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7n-4A0A075B620 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC14.62□□□□□ -0.07
Trav7n-4A0A075B620 AC124603.1-201ENSMUST00000223843 308 ntBASIC14.62□□□□□ -0.07
Trav7n-4A0A075B620 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7n-4A0A075B620 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7n-4A0A075B620 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7n-4A0A075B620 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7n-4A0A075B620 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.62□□□□□ -0.07
Trav7n-4A0A075B620 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7n-4A0A075B620 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7n-4A0A075B620 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav7n-4A0A075B620 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7n-4A0A075B620 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav7n-4A0A075B620 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7n-4A0A075B620 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7n-4A0A075B620 Gm43592-201ENSMUST00000196922 1165 ntBASIC14.61□□□□□ -0.07
Trav7n-4A0A075B620 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7n-4A0A075B620 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7n-4A0A075B620 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav7n-4A0A075B620 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7n-4A0A075B620 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7n-4A0A075B620 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav7n-4A0A075B620 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav7n-4A0A075B620 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav7n-4A0A075B620 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav7n-4A0A075B620 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7n-4A0A075B620 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7n-4A0A075B620 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7n-4A0A075B620 Gm20100-201ENSMUST00000209418 2272 ntBASIC14.59□□□□□ -0.07
Trav7n-4A0A075B620 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7n-4A0A075B620 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7n-4A0A075B620 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7n-4A0A075B620 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7n-4A0A075B620 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7n-4A0A075B620 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7n-4A0A075B620 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7n-4A0A075B620 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7n-4A0A075B620 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7n-4A0A075B620 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
Trav7n-4A0A075B620 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Trav7n-4A0A075B620 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav7n-4A0A075B620 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Trav7n-4A0A075B620 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7n-4A0A075B620 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Trav7n-4A0A075B620 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav7n-4A0A075B620 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7n-4A0A075B620 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7n-4A0A075B620 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Trav7n-4A0A075B620 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7n-4A0A075B620 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7n-4A0A075B620 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7n-4A0A075B620 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7n-4A0A075B620 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7n-4A0A075B620 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.58□□□□□ -0.08
Trav7n-4A0A075B620 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7n-4A0A075B620 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7n-4A0A075B620 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Trav7n-4A0A075B620 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Trav7n-4A0A075B620 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7n-4A0A075B620 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Trav7n-4A0A075B620 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7n-4A0A075B620 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Trav7n-4A0A075B620 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7n-4A0A075B620 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7n-4A0A075B620 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav7n-4A0A075B620 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms