Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav6-6A0A075B603 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6-6A0A075B603 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6-6A0A075B603 AC166356.1-201ENSMUST00000228236 1426 ntBASIC14.33□□□□□ -0.11
Trav6-6A0A075B603 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav6-6A0A075B603 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-6A0A075B603 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-6A0A075B603 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-6A0A075B603 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-6A0A075B603 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-6A0A075B603 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-6A0A075B603 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC14.33□□□□□ -0.12
Trav6-6A0A075B603 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav6-6A0A075B603 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-6A0A075B603 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Trav6-6A0A075B603 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.33□□□□□ -0.12
Trav6-6A0A075B603 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Trav6-6A0A075B603 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-6A0A075B603 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-6A0A075B603 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-6A0A075B603 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav6-6A0A075B603 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-6A0A075B603 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav6-6A0A075B603 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-6A0A075B603 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-6A0A075B603 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-6A0A075B603 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-6A0A075B603 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC14.32□□□□□ -0.12
Trav6-6A0A075B603 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Trav6-6A0A075B603 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-6A0A075B603 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC14.32□□□□□ -0.12
Trav6-6A0A075B603 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trav6-6A0A075B603 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trav6-6A0A075B603 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Trav6-6A0A075B603 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-6A0A075B603 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-6A0A075B603 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav6-6A0A075B603 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-6A0A075B603 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-6A0A075B603 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav6-6A0A075B603 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-6A0A075B603 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-6A0A075B603 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav6-6A0A075B603 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav6-6A0A075B603 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-6A0A075B603 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-6A0A075B603 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-6A0A075B603 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-6A0A075B603 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav6-6A0A075B603 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.3□□□□□ -0.12
Trav6-6A0A075B603 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav6-6A0A075B603 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-6A0A075B603 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-6A0A075B603 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-6A0A075B603 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav6-6A0A075B603 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.3□□□□□ -0.12
Trav6-6A0A075B603 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-6A0A075B603 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav6-6A0A075B603 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav6-6A0A075B603 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-6A0A075B603 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.29□□□□□ -0.12
Trav6-6A0A075B603 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-6A0A075B603 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-6A0A075B603 Gm42501-201ENSMUST00000200220 1026 ntBASIC14.29□□□□□ -0.12
Trav6-6A0A075B603 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-6A0A075B603 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-6A0A075B603 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-6A0A075B603 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-6A0A075B603 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.29□□□□□ -0.12
Trav6-6A0A075B603 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-6A0A075B603 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-6A0A075B603 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav6-6A0A075B603 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-6A0A075B603 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav6-6A0A075B603 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms