Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav9-1A0A075B601 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav9-1A0A075B601 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.01□□□□□ -0.01
Trav9-1A0A075B601 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.01□□□□□ -0.01
Trav9-1A0A075B601 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav9-1A0A075B601 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9-1A0A075B601 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trav9-1A0A075B601 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9-1A0A075B601 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9-1A0A075B601 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9-1A0A075B601 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9-1A0A075B601 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9-1A0A075B601 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.01□□□□□ -0.01
Trav9-1A0A075B601 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9-1A0A075B601 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9-1A0A075B601 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9-1A0A075B601 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9-1A0A075B601 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9-1A0A075B601 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9-1A0A075B601 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.01□□□□□ -0.01
Trav9-1A0A075B601 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9-1A0A075B601 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9-1A0A075B601 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9-1A0A075B601 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Trav9-1A0A075B601 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9-1A0A075B601 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9-1A0A075B601 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9-1A0A075B601 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9-1A0A075B601 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav9-1A0A075B601 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC15□□□□□ -0.01
Trav9-1A0A075B601 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9-1A0A075B601 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9-1A0A075B601 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9-1A0A075B601 Gm5112-201ENSMUST00000204407 2368 ntBASIC15□□□□□ -0.01
Trav9-1A0A075B601 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav9-1A0A075B601 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav9-1A0A075B601 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav9-1A0A075B601 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-1A0A075B601 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-1A0A075B601 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-1A0A075B601 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
Trav9-1A0A075B601 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC14.99□□□□□ -0.01
Trav9-1A0A075B601 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-1A0A075B601 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.99□□□□□ -0.01
Trav9-1A0A075B601 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-1A0A075B601 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trav9-1A0A075B601 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.99□□□□□ -0.01
Trav9-1A0A075B601 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-1A0A075B601 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-1A0A075B601 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-1A0A075B601 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-1A0A075B601 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Trav9-1A0A075B601 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-1A0A075B601 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav9-1A0A075B601 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
Trav9-1A0A075B601 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9-1A0A075B601 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9-1A0A075B601 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9-1A0A075B601 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9-1A0A075B601 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9-1A0A075B601 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9-1A0A075B601 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9-1A0A075B601 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.98□□□□□ -0.01
Trav9-1A0A075B601 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.98□□□□□ -0.01
Trav9-1A0A075B601 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC14.98□□□□□ -0.01
Trav9-1A0A075B601 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
Trav9-1A0A075B601 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9-1A0A075B601 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9-1A0A075B601 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9-1A0A075B601 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9-1A0A075B601 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trav9-1A0A075B601 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.97□□□□□ -0.01
Trav9-1A0A075B601 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9-1A0A075B601 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9-1A0A075B601 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9-1A0A075B601 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9-1A0A075B601 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.97□□□□□ -0.01
Trav9-1A0A075B601 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Trav9-1A0A075B601 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9-1A0A075B601 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9-1A0A075B601 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9-1A0A075B601 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9-1A0A075B601 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9-1A0A075B601 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9-1A0A075B601 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9-1A0A075B601 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trav9-1A0A075B601 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9-1A0A075B601 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trav9-1A0A075B601 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9-1A0A075B601 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9-1A0A075B601 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9-1A0A075B601 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9-1A0A075B601 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Trav9-1A0A075B601 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9-1A0A075B601 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9-1A0A075B601 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9-1A0A075B601 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav9-1A0A075B601 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.96□□□□□ -0.01
Trav9-1A0A075B601 Gm45640-201ENSMUST00000210665 1896 ntBASIC14.96□□□□□ -0.01
Trav9-1A0A075B601 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms