Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Gm26833-201ENSMUST00000180899 440 ntBASIC15.22■□□□□ 0.03
Ighv1-55A0A075B5W6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.22■□□□□ 0.03
Ighv1-55A0A075B5W6 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-55A0A075B5W6 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-55A0A075B5W6 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Ighv1-55A0A075B5W6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-55A0A075B5W6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-55A0A075B5W6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-55A0A075B5W6 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-55A0A075B5W6 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.21■□□□□ 0.03
Ighv1-55A0A075B5W6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ighv1-55A0A075B5W6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Ighv1-55A0A075B5W6 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC15.21■□□□□ 0.03
Ighv1-55A0A075B5W6 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Ighv1-55A0A075B5W6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv1-55A0A075B5W6 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv1-55A0A075B5W6 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv1-55A0A075B5W6 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv1-55A0A075B5W6 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Ighv1-55A0A075B5W6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-55A0A075B5W6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-55A0A075B5W6 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-55A0A075B5W6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-55A0A075B5W6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Ighv1-55A0A075B5W6 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-55A0A075B5W6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-55A0A075B5W6 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-55A0A075B5W6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-55A0A075B5W6 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.2■□□□□ 0.02
Ighv1-55A0A075B5W6 Gm40848-201ENSMUST00000221998 324 ntBASIC15.2■□□□□ 0.02
Ighv1-55A0A075B5W6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.2■□□□□ 0.02
Ighv1-55A0A075B5W6 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-55A0A075B5W6 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-55A0A075B5W6 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-55A0A075B5W6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-55A0A075B5W6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-55A0A075B5W6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-55A0A075B5W6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-55A0A075B5W6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-55A0A075B5W6 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Ighv1-55A0A075B5W6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-55A0A075B5W6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-55A0A075B5W6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-55A0A075B5W6 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Ighv1-55A0A075B5W6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
Ighv1-55A0A075B5W6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-55A0A075B5W6 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC15.19■□□□□ 0.02
Ighv1-55A0A075B5W6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ighv1-55A0A075B5W6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.19■□□□□ 0.02
Ighv1-55A0A075B5W6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-55A0A075B5W6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Ighv1-55A0A075B5W6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Ighv1-55A0A075B5W6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-55A0A075B5W6 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-55A0A075B5W6 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-55A0A075B5W6 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Ighv1-55A0A075B5W6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.18■□□□□ 0.02
Ighv1-55A0A075B5W6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-55A0A075B5W6 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.18■□□□□ 0.02
Ighv1-55A0A075B5W6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-55A0A075B5W6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Ighv1-55A0A075B5W6 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-55A0A075B5W6 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-55A0A075B5W6 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-55A0A075B5W6 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Ighv1-55A0A075B5W6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Ighv1-55A0A075B5W6 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-55A0A075B5W6 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Ighv1-55A0A075B5W6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-55A0A075B5W6 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-55A0A075B5W6 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Ighv1-55A0A075B5W6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Ighv1-55A0A075B5W6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Ighv1-55A0A075B5W6 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Ighv1-55A0A075B5W6 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.17■□□□□ 0.02
Ighv1-55A0A075B5W6 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-55A0A075B5W6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-55A0A075B5W6 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-55A0A075B5W6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-55A0A075B5W6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-55A0A075B5W6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-55A0A075B5W6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC15.17■□□□□ 0.02
Ighv1-55A0A075B5W6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-55A0A075B5W6 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-55A0A075B5W6 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Ighv1-55A0A075B5W6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Ighv1-55A0A075B5W6 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Ighv1-55A0A075B5W6 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-55A0A075B5W6 Gm32699-201ENSMUST00000221728 1988 ntBASIC15.16■□□□□ 0.02
Ighv1-55A0A075B5W6 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Ighv1-55A0A075B5W6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
Ighv1-55A0A075B5W6 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ighv1-55A0A075B5W6 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.16■□□□□ 0.02
Ighv1-55A0A075B5W6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-55A0A075B5W6 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-55A0A075B5W6 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.16■□□□□ 0.02
Ighv1-55A0A075B5W6 Gm27801-201ENSMUST00000184174 223 ntBASIC15.16■□□□□ 0.02
Ighv1-55A0A075B5W6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-55A0A075B5W6 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ighv1-55A0A075B5W6 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms