Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
H2afb3S4R1G7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb3S4R1G7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb3S4R1G7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb3S4R1G7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
H2afb3S4R1G7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb3S4R1G7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb3S4R1G7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb3S4R1G7 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb3S4R1G7 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
H2afb3S4R1G7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb3S4R1G7 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.36■□□□□ 0.37
H2afb3S4R1G7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb3S4R1G7 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb3S4R1G7 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.36■□□□□ 0.37
H2afb3S4R1G7 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
H2afb3S4R1G7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb3S4R1G7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.35■□□□□ 0.37
H2afb3S4R1G7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb3S4R1G7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.35■□□□□ 0.37
H2afb3S4R1G7 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.35■□□□□ 0.37
H2afb3S4R1G7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb3S4R1G7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb3S4R1G7 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb3S4R1G7 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb3S4R1G7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
H2afb3S4R1G7 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
H2afb3S4R1G7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC17.34■□□□□ 0.37
H2afb3S4R1G7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb3S4R1G7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb3S4R1G7 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.34■□□□□ 0.37
H2afb3S4R1G7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb3S4R1G7 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb3S4R1G7 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb3S4R1G7 AA386476-201ENSMUST00000098781 1665 ntBASIC17.34■□□□□ 0.37
H2afb3S4R1G7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb3S4R1G7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb3S4R1G7 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
H2afb3S4R1G7 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
H2afb3S4R1G7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
H2afb3S4R1G7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
H2afb3S4R1G7 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
H2afb3S4R1G7 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
H2afb3S4R1G7 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.33■□□□□ 0.37
H2afb3S4R1G7 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
H2afb3S4R1G7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
H2afb3S4R1G7 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
H2afb3S4R1G7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
H2afb3S4R1G7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.33■□□□□ 0.36
H2afb3S4R1G7 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.33■□□□□ 0.36
H2afb3S4R1G7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
H2afb3S4R1G7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
H2afb3S4R1G7 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
H2afb3S4R1G7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
H2afb3S4R1G7 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb3S4R1G7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.32■□□□□ 0.36
H2afb3S4R1G7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
H2afb3S4R1G7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb3S4R1G7 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb3S4R1G7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb3S4R1G7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
H2afb3S4R1G7 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb3S4R1G7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.31■□□□□ 0.36
H2afb3S4R1G7 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb3S4R1G7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb3S4R1G7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb3S4R1G7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb3S4R1G7 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb3S4R1G7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
H2afb3S4R1G7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb3S4R1G7 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb3S4R1G7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.31■□□□□ 0.36
H2afb3S4R1G7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb3S4R1G7 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb3S4R1G7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb3S4R1G7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb3S4R1G7 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
H2afb3S4R1G7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
H2afb3S4R1G7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.3■□□□□ 0.36
H2afb3S4R1G7 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb3S4R1G7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb3S4R1G7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
H2afb3S4R1G7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
H2afb3S4R1G7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.3■□□□□ 0.36
H2afb3S4R1G7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb3S4R1G7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb3S4R1G7 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb3S4R1G7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb3S4R1G7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
H2afb3S4R1G7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb3S4R1G7 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb3S4R1G7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb3S4R1G7 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb3S4R1G7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb3S4R1G7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb3S4R1G7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb3S4R1G7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.29■□□□□ 0.36
H2afb3S4R1G7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
H2afb3S4R1G7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
H2afb3S4R1G7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms