Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Crlf3Q9Z2L7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Crlf3Q9Z2L7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Crlf3Q9Z2L7 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.49■□□□□ 0.71
Crlf3Q9Z2L7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Crlf3Q9Z2L7 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.49■□□□□ 0.71
Crlf3Q9Z2L7 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.49■□□□□ 0.71
Crlf3Q9Z2L7 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Crlf3Q9Z2L7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Crlf3Q9Z2L7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Crlf3Q9Z2L7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Crlf3Q9Z2L7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Crlf3Q9Z2L7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Crlf3Q9Z2L7 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Crlf3Q9Z2L7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Crlf3Q9Z2L7 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Crlf3Q9Z2L7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
Crlf3Q9Z2L7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Crlf3Q9Z2L7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Crlf3Q9Z2L7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Crlf3Q9Z2L7 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Crlf3Q9Z2L7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Crlf3Q9Z2L7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Crlf3Q9Z2L7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Crlf3Q9Z2L7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Crlf3Q9Z2L7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Crlf3Q9Z2L7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.47■□□□□ 0.71
Crlf3Q9Z2L7 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Crlf3Q9Z2L7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Crlf3Q9Z2L7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Crlf3Q9Z2L7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Crlf3Q9Z2L7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Crlf3Q9Z2L7 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Crlf3Q9Z2L7 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Crlf3Q9Z2L7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Crlf3Q9Z2L7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Crlf3Q9Z2L7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Crlf3Q9Z2L7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Crlf3Q9Z2L7 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Crlf3Q9Z2L7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Crlf3Q9Z2L7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Crlf3Q9Z2L7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Crlf3Q9Z2L7 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Crlf3Q9Z2L7 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Crlf3Q9Z2L7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Crlf3Q9Z2L7 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.46■□□□□ 0.71
Crlf3Q9Z2L7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Crlf3Q9Z2L7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Crlf3Q9Z2L7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Crlf3Q9Z2L7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Crlf3Q9Z2L7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Crlf3Q9Z2L7 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Crlf3Q9Z2L7 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Crlf3Q9Z2L7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Crlf3Q9Z2L7 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.45■□□□□ 0.7
Crlf3Q9Z2L7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Crlf3Q9Z2L7 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Crlf3Q9Z2L7 Gm7417-201ENSMUST00000192950 473 ntBASIC19.45■□□□□ 0.7
Crlf3Q9Z2L7 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.45■□□□□ 0.7
Crlf3Q9Z2L7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Crlf3Q9Z2L7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Crlf3Q9Z2L7 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.45■□□□□ 0.7
Crlf3Q9Z2L7 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Crlf3Q9Z2L7 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Crlf3Q9Z2L7 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Crlf3Q9Z2L7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Crlf3Q9Z2L7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Crlf3Q9Z2L7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Crlf3Q9Z2L7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Crlf3Q9Z2L7 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Crlf3Q9Z2L7 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.44■□□□□ 0.7
Crlf3Q9Z2L7 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.44■□□□□ 0.7
Crlf3Q9Z2L7 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.44■□□□□ 0.7
Crlf3Q9Z2L7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.44■□□□□ 0.7
Crlf3Q9Z2L7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Crlf3Q9Z2L7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Crlf3Q9Z2L7 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Crlf3Q9Z2L7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Crlf3Q9Z2L7 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Crlf3Q9Z2L7 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Crlf3Q9Z2L7 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Crlf3Q9Z2L7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.43■□□□□ 0.7
Crlf3Q9Z2L7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Crlf3Q9Z2L7 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Crlf3Q9Z2L7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Crlf3Q9Z2L7 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Crlf3Q9Z2L7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Crlf3Q9Z2L7 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Crlf3Q9Z2L7 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Crlf3Q9Z2L7 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Crlf3Q9Z2L7 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Crlf3Q9Z2L7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Crlf3Q9Z2L7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Crlf3Q9Z2L7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Crlf3Q9Z2L7 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.42■□□□□ 0.7
Crlf3Q9Z2L7 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Crlf3Q9Z2L7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Crlf3Q9Z2L7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Crlf3Q9Z2L7 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.41■□□□□ 0.7
Crlf3Q9Z2L7 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms