Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cldn9Q9Z0S7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn9Q9Z0S7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn9Q9Z0S7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn9Q9Z0S7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn9Q9Z0S7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn9Q9Z0S7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.6■□□□□ 0.57
Cldn9Q9Z0S7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn9Q9Z0S7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cldn9Q9Z0S7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn9Q9Z0S7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn9Q9Z0S7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Cldn9Q9Z0S7 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn9Q9Z0S7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cldn9Q9Z0S7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cldn9Q9Z0S7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn9Q9Z0S7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn9Q9Z0S7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn9Q9Z0S7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn9Q9Z0S7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn9Q9Z0S7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn9Q9Z0S7 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn9Q9Z0S7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn9Q9Z0S7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.59■□□□□ 0.57
Cldn9Q9Z0S7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.59■□□□□ 0.57
Cldn9Q9Z0S7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn9Q9Z0S7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cldn9Q9Z0S7 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Cldn9Q9Z0S7 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cldn9Q9Z0S7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.58■□□□□ 0.57
Cldn9Q9Z0S7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cldn9Q9Z0S7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cldn9Q9Z0S7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Cldn9Q9Z0S7 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Cldn9Q9Z0S7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Cldn9Q9Z0S7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldn9Q9Z0S7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldn9Q9Z0S7 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Cldn9Q9Z0S7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldn9Q9Z0S7 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldn9Q9Z0S7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldn9Q9Z0S7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Cldn9Q9Z0S7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn9Q9Z0S7 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn9Q9Z0S7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.57■□□□□ 0.56
Cldn9Q9Z0S7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn9Q9Z0S7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn9Q9Z0S7 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn9Q9Z0S7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn9Q9Z0S7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn9Q9Z0S7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cldn9Q9Z0S7 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.56■□□□□ 0.56
Cldn9Q9Z0S7 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Cldn9Q9Z0S7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.56■□□□□ 0.56
Cldn9Q9Z0S7 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn9Q9Z0S7 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Cldn9Q9Z0S7 Gm12251-201ENSMUST00000117893 792 ntBASIC18.56■□□□□ 0.56
Cldn9Q9Z0S7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.56■□□□□ 0.56
Cldn9Q9Z0S7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn9Q9Z0S7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn9Q9Z0S7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cldn9Q9Z0S7 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn9Q9Z0S7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn9Q9Z0S7 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.55■□□□□ 0.56
Cldn9Q9Z0S7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Cldn9Q9Z0S7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn9Q9Z0S7 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.55■□□□□ 0.56
Cldn9Q9Z0S7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cldn9Q9Z0S7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Cldn9Q9Z0S7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn9Q9Z0S7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn9Q9Z0S7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn9Q9Z0S7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn9Q9Z0S7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn9Q9Z0S7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cldn9Q9Z0S7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn9Q9Z0S7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn9Q9Z0S7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn9Q9Z0S7 Gm12821-201ENSMUST00000120022 600 ntBASIC18.54■□□□□ 0.56
Cldn9Q9Z0S7 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn9Q9Z0S7 Mir7075-201ENSMUST00000184187 82 ntBASIC18.54■□□□□ 0.56
Cldn9Q9Z0S7 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Cldn9Q9Z0S7 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn9Q9Z0S7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn9Q9Z0S7 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.54■□□□□ 0.56
Cldn9Q9Z0S7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cldn9Q9Z0S7 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn9Q9Z0S7 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn9Q9Z0S7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn9Q9Z0S7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn9Q9Z0S7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn9Q9Z0S7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn9Q9Z0S7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC18.53■□□□□ 0.56
Cldn9Q9Z0S7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.53■□□□□ 0.56
Cldn9Q9Z0S7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn9Q9Z0S7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Cldn9Q9Z0S7 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn9Q9Z0S7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn9Q9Z0S7 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cldn9Q9Z0S7 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms