Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cx3cr1Q9Z0D9 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.4■□□□□ 0.22
Cx3cr1Q9Z0D9 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cx3cr1Q9Z0D9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Cx3cr1Q9Z0D9 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cx3cr1Q9Z0D9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cx3cr1Q9Z0D9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cx3cr1Q9Z0D9 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cx3cr1Q9Z0D9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Cx3cr1Q9Z0D9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Cx3cr1Q9Z0D9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cx3cr1Q9Z0D9 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cx3cr1Q9Z0D9 Gm13238-201ENSMUST00000117655 780 ntBASIC16.39■□□□□ 0.21
Cx3cr1Q9Z0D9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Cx3cr1Q9Z0D9 Gm10232-201ENSMUST00000089221 720 ntBASIC16.39■□□□□ 0.21
Cx3cr1Q9Z0D9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cx3cr1Q9Z0D9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cx3cr1Q9Z0D9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cx3cr1Q9Z0D9 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Cx3cr1Q9Z0D9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cx3cr1Q9Z0D9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cx3cr1Q9Z0D9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Cx3cr1Q9Z0D9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Cx3cr1Q9Z0D9 Gm43530-201ENSMUST00000195920 274 ntBASIC16.38■□□□□ 0.21
Cx3cr1Q9Z0D9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.38■□□□□ 0.21
Cx3cr1Q9Z0D9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cx3cr1Q9Z0D9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cx3cr1Q9Z0D9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cx3cr1Q9Z0D9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Cx3cr1Q9Z0D9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cx3cr1Q9Z0D9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cx3cr1Q9Z0D9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cx3cr1Q9Z0D9 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cx3cr1Q9Z0D9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.37■□□□□ 0.21
Cx3cr1Q9Z0D9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cx3cr1Q9Z0D9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Cx3cr1Q9Z0D9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
Cx3cr1Q9Z0D9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cx3cr1Q9Z0D9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Cx3cr1Q9Z0D9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cx3cr1Q9Z0D9 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cx3cr1Q9Z0D9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Cx3cr1Q9Z0D9 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Cx3cr1Q9Z0D9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cx3cr1Q9Z0D9 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cx3cr1Q9Z0D9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.36■□□□□ 0.21
Cx3cr1Q9Z0D9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cx3cr1Q9Z0D9 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Cx3cr1Q9Z0D9 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cx3cr1Q9Z0D9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cx3cr1Q9Z0D9 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cx3cr1Q9Z0D9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cx3cr1Q9Z0D9 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cx3cr1Q9Z0D9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC16.36■□□□□ 0.21
Cx3cr1Q9Z0D9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cx3cr1Q9Z0D9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Cx3cr1Q9Z0D9 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.35■□□□□ 0.21
Cx3cr1Q9Z0D9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cx3cr1Q9Z0D9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.35■□□□□ 0.21
Cx3cr1Q9Z0D9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.35■□□□□ 0.21
Cx3cr1Q9Z0D9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cx3cr1Q9Z0D9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cx3cr1Q9Z0D9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Cx3cr1Q9Z0D9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cx3cr1Q9Z0D9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cx3cr1Q9Z0D9 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.34■□□□□ 0.21
Cx3cr1Q9Z0D9 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cx3cr1Q9Z0D9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Cx3cr1Q9Z0D9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cx3cr1Q9Z0D9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cx3cr1Q9Z0D9 Gm40881-201ENSMUST00000223397 166 ntBASIC16.34■□□□□ 0.21
Cx3cr1Q9Z0D9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cx3cr1Q9Z0D9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cx3cr1Q9Z0D9 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cx3cr1Q9Z0D9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cx3cr1Q9Z0D9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cx3cr1Q9Z0D9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cx3cr1Q9Z0D9 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cx3cr1Q9Z0D9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cx3cr1Q9Z0D9 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cx3cr1Q9Z0D9 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cx3cr1Q9Z0D9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cx3cr1Q9Z0D9 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cx3cr1Q9Z0D9 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cx3cr1Q9Z0D9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.33■□□□□ 0.2
Cx3cr1Q9Z0D9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.33■□□□□ 0.2
Cx3cr1Q9Z0D9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cx3cr1Q9Z0D9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Cx3cr1Q9Z0D9 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Cx3cr1Q9Z0D9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Cx3cr1Q9Z0D9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cx3cr1Q9Z0D9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Cx3cr1Q9Z0D9 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.32■□□□□ 0.2
Cx3cr1Q9Z0D9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Cx3cr1Q9Z0D9 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.32■□□□□ 0.2
Cx3cr1Q9Z0D9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cx3cr1Q9Z0D9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cx3cr1Q9Z0D9 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Cx3cr1Q9Z0D9 Gm5921-201ENSMUST00000075898 882 ntBASIC16.32■□□□□ 0.2
Cx3cr1Q9Z0D9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms