Protein–RNA interactions for Protein: Q9WVD4

Clcn5, H(+)/Cl(-) exchange transporter 5, mousemouse

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5Q9WVD4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Clcn5Q9WVD4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clcn5Q9WVD4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Clcn5Q9WVD4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Clcn5Q9WVD4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Clcn5Q9WVD4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Clcn5Q9WVD4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clcn5Q9WVD4 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Clcn5Q9WVD4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn5Q9WVD4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn5Q9WVD4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn5Q9WVD4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn5Q9WVD4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Clcn5Q9WVD4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn5Q9WVD4 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.07■□□□□ 0.8
Clcn5Q9WVD4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.07■□□□□ 0.8
Clcn5Q9WVD4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.07■□□□□ 0.8
Clcn5Q9WVD4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn5Q9WVD4 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Clcn5Q9WVD4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn5Q9WVD4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn5Q9WVD4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn5Q9WVD4 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn5Q9WVD4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn5Q9WVD4 Reep4-203ENSMUST00000226563 1444 ntBASIC20.06■□□□□ 0.8
Clcn5Q9WVD4 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn5Q9WVD4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn5Q9WVD4 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Clcn5Q9WVD4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn5Q9WVD4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Clcn5Q9WVD4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn5Q9WVD4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn5Q9WVD4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn5Q9WVD4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn5Q9WVD4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Clcn5Q9WVD4 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn5Q9WVD4 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Clcn5Q9WVD4 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
Clcn5Q9WVD4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.05■□□□□ 0.8
Clcn5Q9WVD4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Clcn5Q9WVD4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn5Q9WVD4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Clcn5Q9WVD4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn5Q9WVD4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Clcn5Q9WVD4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn5Q9WVD4 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.04■□□□□ 0.8
Clcn5Q9WVD4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn5Q9WVD4 Mir7071-201ENSMUST00000184847 69 ntBASIC20.04■□□□□ 0.8
Clcn5Q9WVD4 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn5Q9WVD4 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn5Q9WVD4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Clcn5Q9WVD4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn5Q9WVD4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Clcn5Q9WVD4 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn5Q9WVD4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn5Q9WVD4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.03■□□□□ 0.8
Clcn5Q9WVD4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn5Q9WVD4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Clcn5Q9WVD4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.03■□□□□ 0.8
Clcn5Q9WVD4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn5Q9WVD4 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.03■□□□□ 0.8
Clcn5Q9WVD4 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.03■□□□□ 0.8
Clcn5Q9WVD4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn5Q9WVD4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn5Q9WVD4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn5Q9WVD4 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn5Q9WVD4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Clcn5Q9WVD4 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn5Q9WVD4 Notumos-201ENSMUST00000151998 2659 ntBASIC20.02■□□□□ 0.8
Clcn5Q9WVD4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.02■□□□□ 0.8
Clcn5Q9WVD4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Clcn5Q9WVD4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn5Q9WVD4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Clcn5Q9WVD4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.02■□□□□ 0.8
Clcn5Q9WVD4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Clcn5Q9WVD4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn5Q9WVD4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn5Q9WVD4 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.01■□□□□ 0.79
Clcn5Q9WVD4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.01■□□□□ 0.79
Clcn5Q9WVD4 Gm12527-201ENSMUST00000117967 564 ntBASIC20.01■□□□□ 0.79
Clcn5Q9WVD4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn5Q9WVD4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn5Q9WVD4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn5Q9WVD4 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn5Q9WVD4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn5Q9WVD4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn5Q9WVD4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Clcn5Q9WVD4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn5Q9WVD4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.01■□□□□ 0.79
Clcn5Q9WVD4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn5Q9WVD4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Clcn5Q9WVD4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Clcn5Q9WVD4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn5Q9WVD4 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn5Q9WVD4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn5Q9WVD4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Clcn5Q9WVD4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20■□□□□ 0.79
Clcn5Q9WVD4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Clcn5Q9WVD4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20■□□□□ 0.79
Clcn5Q9WVD4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms