Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClcnkaQ9WUB7 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
ClcnkaQ9WUB7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ClcnkaQ9WUB7 Gm12251-201ENSMUST00000117893 792 ntBASIC17.78■□□□□ 0.44
ClcnkaQ9WUB7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ClcnkaQ9WUB7 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ClcnkaQ9WUB7 Gm45417-201ENSMUST00000209533 758 ntBASIC17.78■□□□□ 0.44
ClcnkaQ9WUB7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClcnkaQ9WUB7 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ClcnkaQ9WUB7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ClcnkaQ9WUB7 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClcnkaQ9WUB7 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ClcnkaQ9WUB7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ClcnkaQ9WUB7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClcnkaQ9WUB7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClcnkaQ9WUB7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClcnkaQ9WUB7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.77■□□□□ 0.44
ClcnkaQ9WUB7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClcnkaQ9WUB7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClcnkaQ9WUB7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClcnkaQ9WUB7 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ClcnkaQ9WUB7 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
ClcnkaQ9WUB7 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ClcnkaQ9WUB7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ClcnkaQ9WUB7 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ClcnkaQ9WUB7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ClcnkaQ9WUB7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.76■□□□□ 0.43
ClcnkaQ9WUB7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ClcnkaQ9WUB7 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ClcnkaQ9WUB7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ClcnkaQ9WUB7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ClcnkaQ9WUB7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ClcnkaQ9WUB7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ClcnkaQ9WUB7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.76■□□□□ 0.43
ClcnkaQ9WUB7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
ClcnkaQ9WUB7 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClcnkaQ9WUB7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClcnkaQ9WUB7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ClcnkaQ9WUB7 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClcnkaQ9WUB7 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClcnkaQ9WUB7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClcnkaQ9WUB7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC17.75■□□□□ 0.43
ClcnkaQ9WUB7 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClcnkaQ9WUB7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClcnkaQ9WUB7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.75■□□□□ 0.43
ClcnkaQ9WUB7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClcnkaQ9WUB7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClcnkaQ9WUB7 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClcnkaQ9WUB7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.75■□□□□ 0.43
ClcnkaQ9WUB7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClcnkaQ9WUB7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ClcnkaQ9WUB7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
ClcnkaQ9WUB7 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC17.74■□□□□ 0.43
ClcnkaQ9WUB7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
ClcnkaQ9WUB7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ClcnkaQ9WUB7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ClcnkaQ9WUB7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ClcnkaQ9WUB7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ClcnkaQ9WUB7 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
ClcnkaQ9WUB7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ClcnkaQ9WUB7 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
ClcnkaQ9WUB7 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ClcnkaQ9WUB7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
ClcnkaQ9WUB7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ClcnkaQ9WUB7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
ClcnkaQ9WUB7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
ClcnkaQ9WUB7 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
ClcnkaQ9WUB7 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ClcnkaQ9WUB7 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ClcnkaQ9WUB7 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
ClcnkaQ9WUB7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
ClcnkaQ9WUB7 Gm8493-201ENSMUST00000196881 489 ntBASIC17.73■□□□□ 0.43
ClcnkaQ9WUB7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ClcnkaQ9WUB7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
ClcnkaQ9WUB7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ClcnkaQ9WUB7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
ClcnkaQ9WUB7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.72■□□□□ 0.43
ClcnkaQ9WUB7 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ClcnkaQ9WUB7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ClcnkaQ9WUB7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ClcnkaQ9WUB7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.72■□□□□ 0.43
ClcnkaQ9WUB7 AA386476-201ENSMUST00000098781 1665 ntBASIC17.72■□□□□ 0.43
ClcnkaQ9WUB7 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
ClcnkaQ9WUB7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.72■□□□□ 0.43
ClcnkaQ9WUB7 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.72■□□□□ 0.43
ClcnkaQ9WUB7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
ClcnkaQ9WUB7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
ClcnkaQ9WUB7 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ClcnkaQ9WUB7 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
ClcnkaQ9WUB7 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ClcnkaQ9WUB7 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ClcnkaQ9WUB7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ClcnkaQ9WUB7 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.43
ClcnkaQ9WUB7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
ClcnkaQ9WUB7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ClcnkaQ9WUB7 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ClcnkaQ9WUB7 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
ClcnkaQ9WUB7 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
ClcnkaQ9WUB7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
ClcnkaQ9WUB7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 161 ms