Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.6■□□□□ 0.09
Crlf1Q9JM58 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Crlf1Q9JM58 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Crlf1Q9JM58 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Crlf1Q9JM58 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Crlf1Q9JM58 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC15.59■□□□□ 0.09
Crlf1Q9JM58 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Crlf1Q9JM58 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.59■□□□□ 0.09
Crlf1Q9JM58 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Crlf1Q9JM58 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Crlf1Q9JM58 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Crlf1Q9JM58 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Crlf1Q9JM58 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Crlf1Q9JM58 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Crlf1Q9JM58 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Crlf1Q9JM58 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Crlf1Q9JM58 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC15.58■□□□□ 0.08
Crlf1Q9JM58 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Crlf1Q9JM58 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Crlf1Q9JM58 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Crlf1Q9JM58 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Crlf1Q9JM58 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Crlf1Q9JM58 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Crlf1Q9JM58 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Crlf1Q9JM58 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Crlf1Q9JM58 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Crlf1Q9JM58 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Crlf1Q9JM58 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC15.57■□□□□ 0.08
Crlf1Q9JM58 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Crlf1Q9JM58 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Crlf1Q9JM58 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Crlf1Q9JM58 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Crlf1Q9JM58 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.57■□□□□ 0.08
Crlf1Q9JM58 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Crlf1Q9JM58 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
Crlf1Q9JM58 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Crlf1Q9JM58 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Crlf1Q9JM58 Gm43403-201ENSMUST00000198011 1786 ntBASIC15.57■□□□□ 0.08
Crlf1Q9JM58 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Crlf1Q9JM58 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Crlf1Q9JM58 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Crlf1Q9JM58 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
Crlf1Q9JM58 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Crlf1Q9JM58 Gm2559-201ENSMUST00000201323 363 ntBASIC15.56■□□□□ 0.08
Crlf1Q9JM58 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Crlf1Q9JM58 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.56■□□□□ 0.08
Crlf1Q9JM58 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Crlf1Q9JM58 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Crlf1Q9JM58 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Crlf1Q9JM58 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Crlf1Q9JM58 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.56■□□□□ 0.08
Crlf1Q9JM58 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Crlf1Q9JM58 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Crlf1Q9JM58 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Crlf1Q9JM58 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Crlf1Q9JM58 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Crlf1Q9JM58 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Crlf1Q9JM58 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Crlf1Q9JM58 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Crlf1Q9JM58 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Crlf1Q9JM58 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Crlf1Q9JM58 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Crlf1Q9JM58 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Crlf1Q9JM58 Gm37055-201ENSMUST00000191866 133 ntBASIC15.55■□□□□ 0.08
Crlf1Q9JM58 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Crlf1Q9JM58 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Crlf1Q9JM58 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Crlf1Q9JM58 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Crlf1Q9JM58 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Crlf1Q9JM58 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Crlf1Q9JM58 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Crlf1Q9JM58 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Crlf1Q9JM58 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Crlf1Q9JM58 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Crlf1Q9JM58 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Crlf1Q9JM58 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.54■□□□□ 0.08
Crlf1Q9JM58 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Crlf1Q9JM58 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Crlf1Q9JM58 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Crlf1Q9JM58 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Crlf1Q9JM58 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Crlf1Q9JM58 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.54■□□□□ 0.08
Crlf1Q9JM58 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Crlf1Q9JM58 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Crlf1Q9JM58 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Crlf1Q9JM58 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Crlf1Q9JM58 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Crlf1Q9JM58 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Crlf1Q9JM58 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Crlf1Q9JM58 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Crlf1Q9JM58 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC15.53■□□□□ 0.08
Crlf1Q9JM58 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Crlf1Q9JM58 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Crlf1Q9JM58 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Crlf1Q9JM58 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC15.53■□□□□ 0.08
Crlf1Q9JM58 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Crlf1Q9JM58 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Crlf1Q9JM58 Gm9987-201ENSMUST00000069768 567 ntBASIC15.53■□□□□ 0.08
Crlf1Q9JM58 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Crlf1Q9JM58 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms