Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rcl1Q9JJT0 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Rcl1Q9JJT0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rcl1Q9JJT0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.26■□□□□ 0.19
Rcl1Q9JJT0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rcl1Q9JJT0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rcl1Q9JJT0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rcl1Q9JJT0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Rcl1Q9JJT0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rcl1Q9JJT0 Gm12922-201ENSMUST00000120626 809 ntBASIC16.26■□□□□ 0.19
Rcl1Q9JJT0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC16.26■□□□□ 0.19
Rcl1Q9JJT0 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rcl1Q9JJT0 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rcl1Q9JJT0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rcl1Q9JJT0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rcl1Q9JJT0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rcl1Q9JJT0 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.26■□□□□ 0.19
Rcl1Q9JJT0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rcl1Q9JJT0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rcl1Q9JJT0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rcl1Q9JJT0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rcl1Q9JJT0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rcl1Q9JJT0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rcl1Q9JJT0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.25■□□□□ 0.19
Rcl1Q9JJT0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.25■□□□□ 0.19
Rcl1Q9JJT0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Rcl1Q9JJT0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rcl1Q9JJT0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rcl1Q9JJT0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rcl1Q9JJT0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rcl1Q9JJT0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rcl1Q9JJT0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rcl1Q9JJT0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rcl1Q9JJT0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rcl1Q9JJT0 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rcl1Q9JJT0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rcl1Q9JJT0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rcl1Q9JJT0 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rcl1Q9JJT0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rcl1Q9JJT0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rcl1Q9JJT0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rcl1Q9JJT0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rcl1Q9JJT0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Rcl1Q9JJT0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rcl1Q9JJT0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rcl1Q9JJT0 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rcl1Q9JJT0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.23■□□□□ 0.19
Rcl1Q9JJT0 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rcl1Q9JJT0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.23■□□□□ 0.19
Rcl1Q9JJT0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rcl1Q9JJT0 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Rcl1Q9JJT0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.22■□□□□ 0.19
Rcl1Q9JJT0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rcl1Q9JJT0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Rcl1Q9JJT0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Rcl1Q9JJT0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Rcl1Q9JJT0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.22■□□□□ 0.19
Rcl1Q9JJT0 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rcl1Q9JJT0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.22■□□□□ 0.19
Rcl1Q9JJT0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rcl1Q9JJT0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rcl1Q9JJT0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Rcl1Q9JJT0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rcl1Q9JJT0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Rcl1Q9JJT0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Rcl1Q9JJT0 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rcl1Q9JJT0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rcl1Q9JJT0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rcl1Q9JJT0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rcl1Q9JJT0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rcl1Q9JJT0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rcl1Q9JJT0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rcl1Q9JJT0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.21■□□□□ 0.19
Rcl1Q9JJT0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Rcl1Q9JJT0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.21■□□□□ 0.19
Rcl1Q9JJT0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Rcl1Q9JJT0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Rcl1Q9JJT0 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rcl1Q9JJT0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rcl1Q9JJT0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Rcl1Q9JJT0 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.21■□□□□ 0.19
Rcl1Q9JJT0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rcl1Q9JJT0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Rcl1Q9JJT0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.21■□□□□ 0.18
Rcl1Q9JJT0 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Rcl1Q9JJT0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Rcl1Q9JJT0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rcl1Q9JJT0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rcl1Q9JJT0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Rcl1Q9JJT0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rcl1Q9JJT0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rcl1Q9JJT0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rcl1Q9JJT0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.2■□□□□ 0.18
Rcl1Q9JJT0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Rcl1Q9JJT0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rcl1Q9JJT0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Rcl1Q9JJT0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
Rcl1Q9JJT0 Gm9870-201ENSMUST00000063874 645 ntBASIC16.2■□□□□ 0.18
Rcl1Q9JJT0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Rcl1Q9JJT0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms