Protein–RNA interactions for Protein: Q9ERR1

Ndel1, Nuclear distribution protein nudE-like 1, mousemouse

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndel1Q9ERR1 Gm7417-201ENSMUST00000192950 473 ntBASIC18.03■□□□□ 0.48
Ndel1Q9ERR1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ndel1Q9ERR1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ndel1Q9ERR1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.03■□□□□ 0.48
Ndel1Q9ERR1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ndel1Q9ERR1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ndel1Q9ERR1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Ndel1Q9ERR1 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ndel1Q9ERR1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.03■□□□□ 0.48
Ndel1Q9ERR1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ndel1Q9ERR1 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ndel1Q9ERR1 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.02■□□□□ 0.48
Ndel1Q9ERR1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.02■□□□□ 0.48
Ndel1Q9ERR1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.02■□□□□ 0.48
Ndel1Q9ERR1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ndel1Q9ERR1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ndel1Q9ERR1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ndel1Q9ERR1 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ndel1Q9ERR1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
Ndel1Q9ERR1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ndel1Q9ERR1 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
Ndel1Q9ERR1 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndel1Q9ERR1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndel1Q9ERR1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ndel1Q9ERR1 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Ndel1Q9ERR1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndel1Q9ERR1 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndel1Q9ERR1 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Ndel1Q9ERR1 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndel1Q9ERR1 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndel1Q9ERR1 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ndel1Q9ERR1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ndel1Q9ERR1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Ndel1Q9ERR1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ndel1Q9ERR1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ndel1Q9ERR1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ndel1Q9ERR1 Gm5522-201ENSMUST00000189483 1242 ntBASIC18■□□□□ 0.47
Ndel1Q9ERR1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18■□□□□ 0.47
Ndel1Q9ERR1 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18■□□□□ 0.47
Ndel1Q9ERR1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18■□□□□ 0.47
Ndel1Q9ERR1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ndel1Q9ERR1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ndel1Q9ERR1 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Ndel1Q9ERR1 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ndel1Q9ERR1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndel1Q9ERR1 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Ndel1Q9ERR1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndel1Q9ERR1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Ndel1Q9ERR1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ndel1Q9ERR1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndel1Q9ERR1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ndel1Q9ERR1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ndel1Q9ERR1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndel1Q9ERR1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.99■□□□□ 0.47
Ndel1Q9ERR1 Gm9870-201ENSMUST00000063874 645 ntBASIC17.99■□□□□ 0.47
Ndel1Q9ERR1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.99■□□□□ 0.47
Ndel1Q9ERR1 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndel1Q9ERR1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ndel1Q9ERR1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ndel1Q9ERR1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndel1Q9ERR1 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndel1Q9ERR1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.98■□□□□ 0.47
Ndel1Q9ERR1 Gm43530-201ENSMUST00000195920 274 ntBASIC17.98■□□□□ 0.47
Ndel1Q9ERR1 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.98■□□□□ 0.47
Ndel1Q9ERR1 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ndel1Q9ERR1 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndel1Q9ERR1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ndel1Q9ERR1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ndel1Q9ERR1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndel1Q9ERR1 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ndel1Q9ERR1 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndel1Q9ERR1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndel1Q9ERR1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ndel1Q9ERR1 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC17.97■□□□□ 0.47
Ndel1Q9ERR1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndel1Q9ERR1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ndel1Q9ERR1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Ndel1Q9ERR1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndel1Q9ERR1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ndel1Q9ERR1 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ndel1Q9ERR1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndel1Q9ERR1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndel1Q9ERR1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.96■□□□□ 0.47
Ndel1Q9ERR1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndel1Q9ERR1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndel1Q9ERR1 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ndel1Q9ERR1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndel1Q9ERR1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndel1Q9ERR1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndel1Q9ERR1 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndel1Q9ERR1 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ndel1Q9ERR1 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ndel1Q9ERR1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ndel1Q9ERR1 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ndel1Q9ERR1 Grk6-206ENSMUST00000224995 2971 ntBASIC17.95■□□□□ 0.46
Ndel1Q9ERR1 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ndel1Q9ERR1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Ndel1Q9ERR1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ndel1Q9ERR1 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ndel1Q9ERR1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms