Protein–RNA interactions for Protein: Q9DBN9

Ddx59, Probable ATP-dependent RNA helicase DDX59, mousemouse

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx59Q9DBN9 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.19■□□□□ 0.66
Ddx59Q9DBN9 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx59Q9DBN9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx59Q9DBN9 Gm45417-201ENSMUST00000209533 758 ntBASIC19.19■□□□□ 0.66
Ddx59Q9DBN9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx59Q9DBN9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx59Q9DBN9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.19■□□□□ 0.66
Ddx59Q9DBN9 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx59Q9DBN9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.18■□□□□ 0.66
Ddx59Q9DBN9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx59Q9DBN9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx59Q9DBN9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx59Q9DBN9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx59Q9DBN9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx59Q9DBN9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx59Q9DBN9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.18■□□□□ 0.66
Ddx59Q9DBN9 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx59Q9DBN9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ddx59Q9DBN9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx59Q9DBN9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx59Q9DBN9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ddx59Q9DBN9 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx59Q9DBN9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx59Q9DBN9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx59Q9DBN9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx59Q9DBN9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx59Q9DBN9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx59Q9DBN9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx59Q9DBN9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Ddx59Q9DBN9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx59Q9DBN9 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ddx59Q9DBN9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx59Q9DBN9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.16■□□□□ 0.66
Ddx59Q9DBN9 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx59Q9DBN9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Ddx59Q9DBN9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx59Q9DBN9 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Ddx59Q9DBN9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx59Q9DBN9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ddx59Q9DBN9 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.16■□□□□ 0.66
Ddx59Q9DBN9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Ddx59Q9DBN9 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.15■□□□□ 0.66
Ddx59Q9DBN9 Gm12251-201ENSMUST00000117893 792 ntBASIC19.15■□□□□ 0.66
Ddx59Q9DBN9 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.15■□□□□ 0.66
Ddx59Q9DBN9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Ddx59Q9DBN9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx59Q9DBN9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx59Q9DBN9 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx59Q9DBN9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ddx59Q9DBN9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Ddx59Q9DBN9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx59Q9DBN9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx59Q9DBN9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.14■□□□□ 0.65
Ddx59Q9DBN9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx59Q9DBN9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Ddx59Q9DBN9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ddx59Q9DBN9 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx59Q9DBN9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx59Q9DBN9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx59Q9DBN9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx59Q9DBN9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ddx59Q9DBN9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx59Q9DBN9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ddx59Q9DBN9 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx59Q9DBN9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx59Q9DBN9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx59Q9DBN9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ddx59Q9DBN9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx59Q9DBN9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx59Q9DBN9 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ddx59Q9DBN9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx59Q9DBN9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.12■□□□□ 0.65
Ddx59Q9DBN9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx59Q9DBN9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.12■□□□□ 0.65
Ddx59Q9DBN9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx59Q9DBN9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx59Q9DBN9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx59Q9DBN9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ddx59Q9DBN9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx59Q9DBN9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx59Q9DBN9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx59Q9DBN9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.11■□□□□ 0.65
Ddx59Q9DBN9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx59Q9DBN9 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.11■□□□□ 0.65
Ddx59Q9DBN9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx59Q9DBN9 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx59Q9DBN9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ddx59Q9DBN9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx59Q9DBN9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
Ddx59Q9DBN9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ddx59Q9DBN9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx59Q9DBN9 Mir7075-201ENSMUST00000184187 82 ntBASIC19.1■□□□□ 0.65
Ddx59Q9DBN9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ddx59Q9DBN9 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Ddx59Q9DBN9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ddx59Q9DBN9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx59Q9DBN9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx59Q9DBN9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ddx59Q9DBN9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ddx59Q9DBN9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms