Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim42Q9D2H5 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trim42Q9D2H5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.28■□□□□ 0.68
Trim42Q9D2H5 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.28■□□□□ 0.68
Trim42Q9D2H5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim42Q9D2H5 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim42Q9D2H5 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim42Q9D2H5 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim42Q9D2H5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim42Q9D2H5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Trim42Q9D2H5 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Trim42Q9D2H5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim42Q9D2H5 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim42Q9D2H5 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim42Q9D2H5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim42Q9D2H5 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim42Q9D2H5 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trim42Q9D2H5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Trim42Q9D2H5 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim42Q9D2H5 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim42Q9D2H5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.26■□□□□ 0.67
Trim42Q9D2H5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim42Q9D2H5 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Trim42Q9D2H5 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.26■□□□□ 0.67
Trim42Q9D2H5 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Trim42Q9D2H5 Gm45444-201ENSMUST00000211394 898 ntBASIC19.26■□□□□ 0.67
Trim42Q9D2H5 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim42Q9D2H5 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim42Q9D2H5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim42Q9D2H5 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim42Q9D2H5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim42Q9D2H5 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trim42Q9D2H5 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Trim42Q9D2H5 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim42Q9D2H5 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.25■□□□□ 0.67
Trim42Q9D2H5 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Trim42Q9D2H5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC19.25■□□□□ 0.67
Trim42Q9D2H5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trim42Q9D2H5 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim42Q9D2H5 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trim42Q9D2H5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim42Q9D2H5 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim42Q9D2H5 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim42Q9D2H5 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim42Q9D2H5 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim42Q9D2H5 Grk6-206ENSMUST00000224995 2971 ntBASIC19.24■□□□□ 0.67
Trim42Q9D2H5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Trim42Q9D2H5 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim42Q9D2H5 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim42Q9D2H5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim42Q9D2H5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim42Q9D2H5 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim42Q9D2H5 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.23■□□□□ 0.67
Trim42Q9D2H5 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trim42Q9D2H5 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Trim42Q9D2H5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim42Q9D2H5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim42Q9D2H5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim42Q9D2H5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim42Q9D2H5 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim42Q9D2H5 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim42Q9D2H5 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim42Q9D2H5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim42Q9D2H5 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim42Q9D2H5 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim42Q9D2H5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim42Q9D2H5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim42Q9D2H5 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim42Q9D2H5 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.22■□□□□ 0.67
Trim42Q9D2H5 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim42Q9D2H5 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim42Q9D2H5 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim42Q9D2H5 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim42Q9D2H5 Gm43231-201ENSMUST00000202960 2258 ntBASIC19.22■□□□□ 0.67
Trim42Q9D2H5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trim42Q9D2H5 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim42Q9D2H5 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim42Q9D2H5 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim42Q9D2H5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim42Q9D2H5 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim42Q9D2H5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim42Q9D2H5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Trim42Q9D2H5 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim42Q9D2H5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim42Q9D2H5 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim42Q9D2H5 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.21■□□□□ 0.67
Trim42Q9D2H5 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim42Q9D2H5 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Trim42Q9D2H5 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim42Q9D2H5 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim42Q9D2H5 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim42Q9D2H5 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim42Q9D2H5 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim42Q9D2H5 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim42Q9D2H5 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim42Q9D2H5 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Trim42Q9D2H5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim42Q9D2H5 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim42Q9D2H5 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim42Q9D2H5 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms