Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Shmt2Q9CZN7 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Shmt2Q9CZN7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Shmt2Q9CZN7 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Shmt2Q9CZN7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shmt2Q9CZN7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Shmt2Q9CZN7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Shmt2Q9CZN7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.44■□□□□ 0.54
Shmt2Q9CZN7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shmt2Q9CZN7 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shmt2Q9CZN7 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Shmt2Q9CZN7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shmt2Q9CZN7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Shmt2Q9CZN7 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shmt2Q9CZN7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shmt2Q9CZN7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shmt2Q9CZN7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shmt2Q9CZN7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shmt2Q9CZN7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Shmt2Q9CZN7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Shmt2Q9CZN7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shmt2Q9CZN7 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.43■□□□□ 0.54
Shmt2Q9CZN7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shmt2Q9CZN7 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shmt2Q9CZN7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Shmt2Q9CZN7 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Shmt2Q9CZN7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shmt2Q9CZN7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shmt2Q9CZN7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shmt2Q9CZN7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shmt2Q9CZN7 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Shmt2Q9CZN7 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Shmt2Q9CZN7 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shmt2Q9CZN7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shmt2Q9CZN7 Gm27454-201ENSMUST00000185090 204 ntBASIC18.42■□□□□ 0.54
Shmt2Q9CZN7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.42■□□□□ 0.54
Shmt2Q9CZN7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shmt2Q9CZN7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Shmt2Q9CZN7 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Shmt2Q9CZN7 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.41■□□□□ 0.54
Shmt2Q9CZN7 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Shmt2Q9CZN7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Shmt2Q9CZN7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.41■□□□□ 0.54
Shmt2Q9CZN7 Gm43137-201ENSMUST00000198052 594 ntBASIC18.41■□□□□ 0.54
Shmt2Q9CZN7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
Shmt2Q9CZN7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shmt2Q9CZN7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shmt2Q9CZN7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Shmt2Q9CZN7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shmt2Q9CZN7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shmt2Q9CZN7 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shmt2Q9CZN7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shmt2Q9CZN7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Shmt2Q9CZN7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shmt2Q9CZN7 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Shmt2Q9CZN7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.4■□□□□ 0.54
Shmt2Q9CZN7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.4■□□□□ 0.54
Shmt2Q9CZN7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.4■□□□□ 0.54
Shmt2Q9CZN7 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Shmt2Q9CZN7 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Shmt2Q9CZN7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Shmt2Q9CZN7 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Shmt2Q9CZN7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Shmt2Q9CZN7 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Shmt2Q9CZN7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Shmt2Q9CZN7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Shmt2Q9CZN7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shmt2Q9CZN7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shmt2Q9CZN7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Shmt2Q9CZN7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Shmt2Q9CZN7 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shmt2Q9CZN7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shmt2Q9CZN7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
Shmt2Q9CZN7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Shmt2Q9CZN7 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Shmt2Q9CZN7 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.39■□□□□ 0.53
Shmt2Q9CZN7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Shmt2Q9CZN7 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Shmt2Q9CZN7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.38■□□□□ 0.53
Shmt2Q9CZN7 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.38■□□□□ 0.53
Shmt2Q9CZN7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shmt2Q9CZN7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Shmt2Q9CZN7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shmt2Q9CZN7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shmt2Q9CZN7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Shmt2Q9CZN7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Shmt2Q9CZN7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.38■□□□□ 0.53
Shmt2Q9CZN7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Shmt2Q9CZN7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Shmt2Q9CZN7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Shmt2Q9CZN7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shmt2Q9CZN7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shmt2Q9CZN7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shmt2Q9CZN7 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Shmt2Q9CZN7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Shmt2Q9CZN7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Shmt2Q9CZN7 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.37■□□□□ 0.53
Shmt2Q9CZN7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Shmt2Q9CZN7 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Shmt2Q9CZN7 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms