Protein–RNA interactions for Protein: Q9CYQ5

Hcfc1r1, Host cell factor C1 regulator 1, mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1r1Q9CYQ5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hcfc1r1Q9CYQ5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Hcfc1r1Q9CYQ5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hcfc1r1Q9CYQ5 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hcfc1r1Q9CYQ5 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.77■□□□□ 0.28
Hcfc1r1Q9CYQ5 Gm43566-201ENSMUST00000196851 808 ntBASIC16.77■□□□□ 0.28
Hcfc1r1Q9CYQ5 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC16.77■□□□□ 0.28
Hcfc1r1Q9CYQ5 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.77■□□□□ 0.28
Hcfc1r1Q9CYQ5 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hcfc1r1Q9CYQ5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Hcfc1r1Q9CYQ5 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hcfc1r1Q9CYQ5 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hcfc1r1Q9CYQ5 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hcfc1r1Q9CYQ5 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Hcfc1r1Q9CYQ5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hcfc1r1Q9CYQ5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcfc1r1Q9CYQ5 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Hcfc1r1Q9CYQ5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcfc1r1Q9CYQ5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcfc1r1Q9CYQ5 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hcfc1r1Q9CYQ5 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Hcfc1r1Q9CYQ5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcfc1r1Q9CYQ5 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.76■□□□□ 0.27
Hcfc1r1Q9CYQ5 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcfc1r1Q9CYQ5 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Hcfc1r1Q9CYQ5 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcfc1r1Q9CYQ5 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.75■□□□□ 0.27
Hcfc1r1Q9CYQ5 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcfc1r1Q9CYQ5 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcfc1r1Q9CYQ5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcfc1r1Q9CYQ5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcfc1r1Q9CYQ5 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.75■□□□□ 0.27
Hcfc1r1Q9CYQ5 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.75■□□□□ 0.27
Hcfc1r1Q9CYQ5 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Hcfc1r1Q9CYQ5 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.75■□□□□ 0.27
Hcfc1r1Q9CYQ5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.75■□□□□ 0.27
Hcfc1r1Q9CYQ5 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcfc1r1Q9CYQ5 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.74■□□□□ 0.27
Hcfc1r1Q9CYQ5 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcfc1r1Q9CYQ5 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcfc1r1Q9CYQ5 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcfc1r1Q9CYQ5 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcfc1r1Q9CYQ5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcfc1r1Q9CYQ5 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcfc1r1Q9CYQ5 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcfc1r1Q9CYQ5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcfc1r1Q9CYQ5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcfc1r1Q9CYQ5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcfc1r1Q9CYQ5 Gm43530-201ENSMUST00000195920 274 ntBASIC16.74■□□□□ 0.27
Hcfc1r1Q9CYQ5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Hcfc1r1Q9CYQ5 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcfc1r1Q9CYQ5 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Hcfc1r1Q9CYQ5 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcfc1r1Q9CYQ5 Grk6-206ENSMUST00000224995 2971 ntBASIC16.74■□□□□ 0.27
Hcfc1r1Q9CYQ5 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.74■□□□□ 0.27
Hcfc1r1Q9CYQ5 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Hcfc1r1Q9CYQ5 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.74■□□□□ 0.27
Hcfc1r1Q9CYQ5 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hcfc1r1Q9CYQ5 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcfc1r1Q9CYQ5 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Hcfc1r1Q9CYQ5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcfc1r1Q9CYQ5 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcfc1r1Q9CYQ5 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcfc1r1Q9CYQ5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcfc1r1Q9CYQ5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcfc1r1Q9CYQ5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcfc1r1Q9CYQ5 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.73■□□□□ 0.27
Hcfc1r1Q9CYQ5 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Hcfc1r1Q9CYQ5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcfc1r1Q9CYQ5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.73■□□□□ 0.27
Hcfc1r1Q9CYQ5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcfc1r1Q9CYQ5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Hcfc1r1Q9CYQ5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Hcfc1r1Q9CYQ5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hcfc1r1Q9CYQ5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hcfc1r1Q9CYQ5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hcfc1r1Q9CYQ5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Hcfc1r1Q9CYQ5 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Hcfc1r1Q9CYQ5 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Hcfc1r1Q9CYQ5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hcfc1r1Q9CYQ5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hcfc1r1Q9CYQ5 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Hcfc1r1Q9CYQ5 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hcfc1r1Q9CYQ5 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Hcfc1r1Q9CYQ5 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Hcfc1r1Q9CYQ5 AA386476-201ENSMUST00000098781 1665 ntBASIC16.72■□□□□ 0.27
Hcfc1r1Q9CYQ5 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hcfc1r1Q9CYQ5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hcfc1r1Q9CYQ5 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hcfc1r1Q9CYQ5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcfc1r1Q9CYQ5 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcfc1r1Q9CYQ5 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcfc1r1Q9CYQ5 Gm10232-201ENSMUST00000089221 720 ntBASIC16.71■□□□□ 0.27
Hcfc1r1Q9CYQ5 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcfc1r1Q9CYQ5 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Hcfc1r1Q9CYQ5 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcfc1r1Q9CYQ5 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Hcfc1r1Q9CYQ5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.7■□□□□ 0.26
Hcfc1r1Q9CYQ5 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Hcfc1r1Q9CYQ5 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms