Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Khdc3Q9CWU5 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.56■□□□□ 0.56
Khdc3Q9CWU5 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC18.56■□□□□ 0.56
Khdc3Q9CWU5 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Khdc3Q9CWU5 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Khdc3Q9CWU5 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Khdc3Q9CWU5 AA386476-201ENSMUST00000098781 1665 ntBASIC18.56■□□□□ 0.56
Khdc3Q9CWU5 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.56■□□□□ 0.56
Khdc3Q9CWU5 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Khdc3Q9CWU5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc3Q9CWU5 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc3Q9CWU5 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc3Q9CWU5 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc3Q9CWU5 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc3Q9CWU5 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.55■□□□□ 0.56
Khdc3Q9CWU5 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC18.55■□□□□ 0.56
Khdc3Q9CWU5 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Khdc3Q9CWU5 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc3Q9CWU5 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc3Q9CWU5 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc3Q9CWU5 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
Khdc3Q9CWU5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc3Q9CWU5 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc3Q9CWU5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Khdc3Q9CWU5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Khdc3Q9CWU5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Khdc3Q9CWU5 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Khdc3Q9CWU5 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.54■□□□□ 0.56
Khdc3Q9CWU5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Khdc3Q9CWU5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Khdc3Q9CWU5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Khdc3Q9CWU5 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Khdc3Q9CWU5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
Khdc3Q9CWU5 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Khdc3Q9CWU5 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Khdc3Q9CWU5 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Khdc3Q9CWU5 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.53■□□□□ 0.56
Khdc3Q9CWU5 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Khdc3Q9CWU5 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Khdc3Q9CWU5 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Khdc3Q9CWU5 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
Khdc3Q9CWU5 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Khdc3Q9CWU5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Khdc3Q9CWU5 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Khdc3Q9CWU5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Khdc3Q9CWU5 Spcs1-204ENSMUST00000226782 949 ntBASIC18.53■□□□□ 0.56
Khdc3Q9CWU5 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Khdc3Q9CWU5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.53■□□□□ 0.56
Khdc3Q9CWU5 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Khdc3Q9CWU5 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.52■□□□□ 0.56
Khdc3Q9CWU5 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.52■□□□□ 0.56
Khdc3Q9CWU5 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Khdc3Q9CWU5 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Khdc3Q9CWU5 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Khdc3Q9CWU5 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Khdc3Q9CWU5 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Khdc3Q9CWU5 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.52■□□□□ 0.56
Khdc3Q9CWU5 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.52■□□□□ 0.56
Khdc3Q9CWU5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.52■□□□□ 0.56
Khdc3Q9CWU5 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Khdc3Q9CWU5 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Khdc3Q9CWU5 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Khdc3Q9CWU5 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Khdc3Q9CWU5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Khdc3Q9CWU5 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Khdc3Q9CWU5 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Khdc3Q9CWU5 Gm12251-201ENSMUST00000117893 792 ntBASIC18.51■□□□□ 0.55
Khdc3Q9CWU5 Gm12821-201ENSMUST00000120022 600 ntBASIC18.51■□□□□ 0.55
Khdc3Q9CWU5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Khdc3Q9CWU5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Khdc3Q9CWU5 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Khdc3Q9CWU5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Khdc3Q9CWU5 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Khdc3Q9CWU5 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Khdc3Q9CWU5 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.5■□□□□ 0.55
Khdc3Q9CWU5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Khdc3Q9CWU5 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.5■□□□□ 0.55
Khdc3Q9CWU5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Khdc3Q9CWU5 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Khdc3Q9CWU5 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Khdc3Q9CWU5 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Khdc3Q9CWU5 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Khdc3Q9CWU5 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Khdc3Q9CWU5 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Khdc3Q9CWU5 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Khdc3Q9CWU5 Gm27454-201ENSMUST00000185090 204 ntBASIC18.49■□□□□ 0.55
Khdc3Q9CWU5 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.49■□□□□ 0.55
Khdc3Q9CWU5 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Khdc3Q9CWU5 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Khdc3Q9CWU5 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Khdc3Q9CWU5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Khdc3Q9CWU5 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Khdc3Q9CWU5 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Khdc3Q9CWU5 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Khdc3Q9CWU5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Khdc3Q9CWU5 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.49■□□□□ 0.55
Khdc3Q9CWU5 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Khdc3Q9CWU5 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Khdc3Q9CWU5 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Khdc3Q9CWU5 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms