Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.91■□□□□ 0.46
Q9CR55 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Q9CR55 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Q9CR55 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q9CR55 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q9CR55 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q9CR55 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q9CR55 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q9CR55 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Q9CR55 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q9CR55 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q9CR55 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q9CR55 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q9CR55 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.9■□□□□ 0.46
Q9CR55 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.9■□□□□ 0.46
Q9CR55 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q9CR55 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Q9CR55 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q9CR55 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q9CR55 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Q9CR55 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.9■□□□□ 0.46
Q9CR55 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Q9CR55 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q9CR55 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q9CR55 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Q9CR55 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q9CR55 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Q9CR55 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q9CR55 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q9CR55 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Q9CR55 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q9CR55 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q9CR55 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q9CR55 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q9CR55 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Q9CR55 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Q9CR55 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q9CR55 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Q9CR55 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q9CR55 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Q9CR55 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Q9CR55 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Q9CR55 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Q9CR55 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Q9CR55 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.88■□□□□ 0.45
Q9CR55 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Q9CR55 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Q9CR55 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Q9CR55 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Q9CR55 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.88■□□□□ 0.45
Q9CR55 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Q9CR55 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Q9CR55 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC17.87■□□□□ 0.45
Q9CR55 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Q9CR55 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.87■□□□□ 0.45
Q9CR55 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Q9CR55 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Q9CR55 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Q9CR55 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Q9CR55 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Q9CR55 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Q9CR55 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Q9CR55 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Q9CR55 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Q9CR55 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Q9CR55 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Q9CR55 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Q9CR55 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Q9CR55 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Q9CR55 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Q9CR55 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Q9CR55 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Q9CR55 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Q9CR55 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Q9CR55 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.85■□□□□ 0.45
Q9CR55 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q9CR55 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q9CR55 Gm44428-201ENSMUST00000204474 874 ntBASIC17.85■□□□□ 0.45
Q9CR55 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q9CR55 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.85■□□□□ 0.45
Q9CR55 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q9CR55 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Q9CR55 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q9CR55 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q9CR55 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q9CR55 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q9CR55 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q9CR55 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Q9CR55 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.84■□□□□ 0.45
Q9CR55 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q9CR55 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q9CR55 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Q9CR55 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Q9CR55 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.84■□□□□ 0.45
Q9CR55 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q9CR55 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q9CR55 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Q9CR55 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Q9CR55 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Q9CR55 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms