Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retreg3Q9CQV4 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retreg3Q9CQV4 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Retreg3Q9CQV4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.49■□□□□ 0.71
Retreg3Q9CQV4 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retreg3Q9CQV4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retreg3Q9CQV4 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retreg3Q9CQV4 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retreg3Q9CQV4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retreg3Q9CQV4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retreg3Q9CQV4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retreg3Q9CQV4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retreg3Q9CQV4 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.48■□□□□ 0.71
Retreg3Q9CQV4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retreg3Q9CQV4 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.48■□□□□ 0.71
Retreg3Q9CQV4 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retreg3Q9CQV4 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retreg3Q9CQV4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retreg3Q9CQV4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Retreg3Q9CQV4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retreg3Q9CQV4 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.47■□□□□ 0.71
Retreg3Q9CQV4 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retreg3Q9CQV4 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retreg3Q9CQV4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.47■□□□□ 0.71
Retreg3Q9CQV4 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retreg3Q9CQV4 Gm11421-201ENSMUST00000122124 294 ntBASIC19.47■□□□□ 0.71
Retreg3Q9CQV4 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.47■□□□□ 0.71
Retreg3Q9CQV4 Gm26833-201ENSMUST00000180899 440 ntBASIC19.47■□□□□ 0.71
Retreg3Q9CQV4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retreg3Q9CQV4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Retreg3Q9CQV4 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retreg3Q9CQV4 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Retreg3Q9CQV4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
Retreg3Q9CQV4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retreg3Q9CQV4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Retreg3Q9CQV4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retreg3Q9CQV4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
Retreg3Q9CQV4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retreg3Q9CQV4 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Retreg3Q9CQV4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retreg3Q9CQV4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retreg3Q9CQV4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Retreg3Q9CQV4 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retreg3Q9CQV4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retreg3Q9CQV4 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retreg3Q9CQV4 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retreg3Q9CQV4 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retreg3Q9CQV4 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retreg3Q9CQV4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retreg3Q9CQV4 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retreg3Q9CQV4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.45■□□□□ 0.7
Retreg3Q9CQV4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retreg3Q9CQV4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Retreg3Q9CQV4 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retreg3Q9CQV4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retreg3Q9CQV4 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retreg3Q9CQV4 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retreg3Q9CQV4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retreg3Q9CQV4 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retreg3Q9CQV4 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retreg3Q9CQV4 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retreg3Q9CQV4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retreg3Q9CQV4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Retreg3Q9CQV4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retreg3Q9CQV4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retreg3Q9CQV4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retreg3Q9CQV4 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retreg3Q9CQV4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.43■□□□□ 0.7
Retreg3Q9CQV4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.43■□□□□ 0.7
Retreg3Q9CQV4 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.43■□□□□ 0.7
Retreg3Q9CQV4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Retreg3Q9CQV4 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retreg3Q9CQV4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retreg3Q9CQV4 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Retreg3Q9CQV4 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg3Q9CQV4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg3Q9CQV4 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg3Q9CQV4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg3Q9CQV4 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg3Q9CQV4 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg3Q9CQV4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg3Q9CQV4 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.42■□□□□ 0.7
Retreg3Q9CQV4 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retreg3Q9CQV4 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg3Q9CQV4 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg3Q9CQV4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg3Q9CQV4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Retreg3Q9CQV4 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.41■□□□□ 0.7
Retreg3Q9CQV4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.41■□□□□ 0.7
Retreg3Q9CQV4 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg3Q9CQV4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg3Q9CQV4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg3Q9CQV4 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.41■□□□□ 0.7
Retreg3Q9CQV4 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retreg3Q9CQV4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg3Q9CQV4 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg3Q9CQV4 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.4■□□□□ 0.7
Retreg3Q9CQV4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Retreg3Q9CQV4 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retreg3Q9CQV4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms