Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm7Q9CQQ8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Lsm7Q9CQQ8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Lsm7Q9CQQ8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lsm7Q9CQQ8 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Lsm7Q9CQQ8 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.58■□□□□ 0.73
Lsm7Q9CQQ8 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.58■□□□□ 0.73
Lsm7Q9CQQ8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Lsm7Q9CQQ8 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Lsm7Q9CQQ8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC19.58■□□□□ 0.72
Lsm7Q9CQQ8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lsm7Q9CQQ8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lsm7Q9CQQ8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Lsm7Q9CQQ8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Lsm7Q9CQQ8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lsm7Q9CQQ8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Lsm7Q9CQQ8 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lsm7Q9CQQ8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.57■□□□□ 0.72
Lsm7Q9CQQ8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Lsm7Q9CQQ8 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Lsm7Q9CQQ8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lsm7Q9CQQ8 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lsm7Q9CQQ8 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lsm7Q9CQQ8 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Lsm7Q9CQQ8 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.57■□□□□ 0.72
Lsm7Q9CQQ8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.57■□□□□ 0.72
Lsm7Q9CQQ8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Lsm7Q9CQQ8 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Lsm7Q9CQQ8 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Lsm7Q9CQQ8 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Lsm7Q9CQQ8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lsm7Q9CQQ8 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lsm7Q9CQQ8 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Lsm7Q9CQQ8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm7Q9CQQ8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm7Q9CQQ8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Lsm7Q9CQQ8 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm7Q9CQQ8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.56■□□□□ 0.72
Lsm7Q9CQQ8 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm7Q9CQQ8 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.56■□□□□ 0.72
Lsm7Q9CQQ8 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.56■□□□□ 0.72
Lsm7Q9CQQ8 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Lsm7Q9CQQ8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm7Q9CQQ8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.56■□□□□ 0.72
Lsm7Q9CQQ8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lsm7Q9CQQ8 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lsm7Q9CQQ8 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lsm7Q9CQQ8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Lsm7Q9CQQ8 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lsm7Q9CQQ8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.55■□□□□ 0.72
Lsm7Q9CQQ8 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.55■□□□□ 0.72
Lsm7Q9CQQ8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lsm7Q9CQQ8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lsm7Q9CQQ8 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lsm7Q9CQQ8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lsm7Q9CQQ8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lsm7Q9CQQ8 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lsm7Q9CQQ8 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Lsm7Q9CQQ8 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lsm7Q9CQQ8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lsm7Q9CQQ8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Lsm7Q9CQQ8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lsm7Q9CQQ8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lsm7Q9CQQ8 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lsm7Q9CQQ8 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lsm7Q9CQQ8 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm7Q9CQQ8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm7Q9CQQ8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.53■□□□□ 0.72
Lsm7Q9CQQ8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Lsm7Q9CQQ8 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Lsm7Q9CQQ8 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm7Q9CQQ8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm7Q9CQQ8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Lsm7Q9CQQ8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.53■□□□□ 0.72
Lsm7Q9CQQ8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Lsm7Q9CQQ8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.53■□□□□ 0.72
Lsm7Q9CQQ8 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.53■□□□□ 0.72
Lsm7Q9CQQ8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm7Q9CQQ8 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Lsm7Q9CQQ8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm7Q9CQQ8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm7Q9CQQ8 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm7Q9CQQ8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lsm7Q9CQQ8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm7Q9CQQ8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm7Q9CQQ8 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.52■□□□□ 0.72
Lsm7Q9CQQ8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm7Q9CQQ8 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.52■□□□□ 0.72
Lsm7Q9CQQ8 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm7Q9CQQ8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm7Q9CQQ8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lsm7Q9CQQ8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm7Q9CQQ8 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm7Q9CQQ8 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm7Q9CQQ8 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm7Q9CQQ8 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lsm7Q9CQQ8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.51■□□□□ 0.71
Lsm7Q9CQQ8 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Lsm7Q9CQQ8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Lsm7Q9CQQ8 Gm37179-201ENSMUST00000194862 823 ntBASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms