Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
Trim16Q99PP9 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim16Q99PP9 Gm27454-201ENSMUST00000185090 204 ntBASIC18.84■□□□□ 0.61
Trim16Q99PP9 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.84■□□□□ 0.61
Trim16Q99PP9 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.84■□□□□ 0.61
Trim16Q99PP9 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
Trim16Q99PP9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim16Q99PP9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim16Q99PP9 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim16Q99PP9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Trim16Q99PP9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim16Q99PP9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim16Q99PP9 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Trim16Q99PP9 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim16Q99PP9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.83■□□□□ 0.6
Trim16Q99PP9 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim16Q99PP9 Gm43137-201ENSMUST00000198052 594 ntBASIC18.83■□□□□ 0.6
Trim16Q99PP9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Trim16Q99PP9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim16Q99PP9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.83■□□□□ 0.6
Trim16Q99PP9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trim16Q99PP9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim16Q99PP9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Trim16Q99PP9 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim16Q99PP9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trim16Q99PP9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim16Q99PP9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.82■□□□□ 0.6
Trim16Q99PP9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim16Q99PP9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim16Q99PP9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trim16Q99PP9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.82■□□□□ 0.6
Trim16Q99PP9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim16Q99PP9 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim16Q99PP9 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim16Q99PP9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim16Q99PP9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim16Q99PP9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim16Q99PP9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trim16Q99PP9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim16Q99PP9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim16Q99PP9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim16Q99PP9 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim16Q99PP9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim16Q99PP9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim16Q99PP9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC18.81■□□□□ 0.6
Trim16Q99PP9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim16Q99PP9 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim16Q99PP9 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Trim16Q99PP9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim16Q99PP9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim16Q99PP9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim16Q99PP9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim16Q99PP9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trim16Q99PP9 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
Trim16Q99PP9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim16Q99PP9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Trim16Q99PP9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim16Q99PP9 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Trim16Q99PP9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim16Q99PP9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim16Q99PP9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim16Q99PP9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim16Q99PP9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim16Q99PP9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim16Q99PP9 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim16Q99PP9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trim16Q99PP9 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim16Q99PP9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
Trim16Q99PP9 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim16Q99PP9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim16Q99PP9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.79■□□□□ 0.6
Trim16Q99PP9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim16Q99PP9 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.79■□□□□ 0.6
Trim16Q99PP9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim16Q99PP9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trim16Q99PP9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Trim16Q99PP9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim16Q99PP9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim16Q99PP9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim16Q99PP9 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
Trim16Q99PP9 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.78■□□□□ 0.6
Trim16Q99PP9 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trim16Q99PP9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim16Q99PP9 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim16Q99PP9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim16Q99PP9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trim16Q99PP9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Trim16Q99PP9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim16Q99PP9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim16Q99PP9 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim16Q99PP9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim16Q99PP9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Trim16Q99PP9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trim16Q99PP9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Trim16Q99PP9 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.77■□□□□ 0.59
Trim16Q99PP9 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trim16Q99PP9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Trim16Q99PP9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim16Q99PP9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trim16Q99PP9 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms