Protein–RNA interactions for Protein: Q99NB8

Ubqln4, Ubiquilin-4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln4Q99NB8 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ubqln4Q99NB8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ubqln4Q99NB8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ubqln4Q99NB8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ubqln4Q99NB8 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Ubqln4Q99NB8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Ubqln4Q99NB8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Ubqln4Q99NB8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ubqln4Q99NB8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ubqln4Q99NB8 Gm8493-201ENSMUST00000196881 489 ntBASIC17.58■□□□□ 0.4
Ubqln4Q99NB8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ubqln4Q99NB8 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Ubqln4Q99NB8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubqln4Q99NB8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubqln4Q99NB8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Ubqln4Q99NB8 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Ubqln4Q99NB8 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.58■□□□□ 0.4
Ubqln4Q99NB8 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.58■□□□□ 0.4
Ubqln4Q99NB8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ubqln4Q99NB8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubqln4Q99NB8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubqln4Q99NB8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubqln4Q99NB8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubqln4Q99NB8 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubqln4Q99NB8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubqln4Q99NB8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubqln4Q99NB8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubqln4Q99NB8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubqln4Q99NB8 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.57■□□□□ 0.4
Ubqln4Q99NB8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.57■□□□□ 0.4
Ubqln4Q99NB8 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubqln4Q99NB8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Ubqln4Q99NB8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.57■□□□□ 0.4
Ubqln4Q99NB8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Ubqln4Q99NB8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Ubqln4Q99NB8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Ubqln4Q99NB8 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubqln4Q99NB8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Ubqln4Q99NB8 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.56■□□□□ 0.4
Ubqln4Q99NB8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubqln4Q99NB8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC17.56■□□□□ 0.4
Ubqln4Q99NB8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubqln4Q99NB8 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubqln4Q99NB8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubqln4Q99NB8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubqln4Q99NB8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Ubqln4Q99NB8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Ubqln4Q99NB8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubqln4Q99NB8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubqln4Q99NB8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.55■□□□□ 0.4
Ubqln4Q99NB8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.55■□□□□ 0.4
Ubqln4Q99NB8 Gm45417-201ENSMUST00000209533 758 ntBASIC17.55■□□□□ 0.4
Ubqln4Q99NB8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubqln4Q99NB8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.55■□□□□ 0.4
Ubqln4Q99NB8 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
Ubqln4Q99NB8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubqln4Q99NB8 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Ubqln4Q99NB8 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Ubqln4Q99NB8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.55■□□□□ 0.4
Ubqln4Q99NB8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Ubqln4Q99NB8 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubqln4Q99NB8 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubqln4Q99NB8 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.54■□□□□ 0.4
Ubqln4Q99NB8 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubqln4Q99NB8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubqln4Q99NB8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ubqln4Q99NB8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.54■□□□□ 0.4
Ubqln4Q99NB8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.54■□□□□ 0.4
Ubqln4Q99NB8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubqln4Q99NB8 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubqln4Q99NB8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Ubqln4Q99NB8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Ubqln4Q99NB8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ubqln4Q99NB8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubqln4Q99NB8 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.53■□□□□ 0.4
Ubqln4Q99NB8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubqln4Q99NB8 Smad6-203ENSMUST00000179458 273 ntBASIC17.53■□□□□ 0.4
Ubqln4Q99NB8 Gm43173-201ENSMUST00000202246 593 ntBASIC17.53■□□□□ 0.4
Ubqln4Q99NB8 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Ubqln4Q99NB8 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubqln4Q99NB8 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Ubqln4Q99NB8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubqln4Q99NB8 Golph3-202ENSMUST00000226517 2359 ntBASIC17.52■□□□□ 0.4
Ubqln4Q99NB8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.52■□□□□ 0.4
Ubqln4Q99NB8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubqln4Q99NB8 Gm6139-201ENSMUST00000079261 882 ntBASIC17.52■□□□□ 0.4
Ubqln4Q99NB8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubqln4Q99NB8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Ubqln4Q99NB8 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ubqln4Q99NB8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Ubqln4Q99NB8 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubqln4Q99NB8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubqln4Q99NB8 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Ubqln4Q99NB8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.51■□□□□ 0.39
Ubqln4Q99NB8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Ubqln4Q99NB8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Ubqln4Q99NB8 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubqln4Q99NB8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.51■□□□□ 0.39
Ubqln4Q99NB8 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Ubqln4Q99NB8 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms