Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lysmd3Q99LE3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lysmd3Q99LE3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lysmd3Q99LE3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lysmd3Q99LE3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd3Q99LE3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd3Q99LE3 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd3Q99LE3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd3Q99LE3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd3Q99LE3 Gm42778-201ENSMUST00000199644 553 ntBASIC20.13■□□□□ 0.81
Lysmd3Q99LE3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.13■□□□□ 0.81
Lysmd3Q99LE3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd3Q99LE3 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Lysmd3Q99LE3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd3Q99LE3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd3Q99LE3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.13■□□□□ 0.81
Lysmd3Q99LE3 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd3Q99LE3 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Lysmd3Q99LE3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd3Q99LE3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Lysmd3Q99LE3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd3Q99LE3 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lysmd3Q99LE3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lysmd3Q99LE3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lysmd3Q99LE3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lysmd3Q99LE3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lysmd3Q99LE3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Lysmd3Q99LE3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lysmd3Q99LE3 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.12■□□□□ 0.81
Lysmd3Q99LE3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Lysmd3Q99LE3 Gm42569-201ENSMUST00000200539 472 ntBASIC20.12■□□□□ 0.81
Lysmd3Q99LE3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Lysmd3Q99LE3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
Lysmd3Q99LE3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lysmd3Q99LE3 Gm10033-202ENSMUST00000211874 928 ntBASIC20.11■□□□□ 0.81
Lysmd3Q99LE3 Gm18671-201ENSMUST00000214826 683 ntBASIC20.11■□□□□ 0.81
Lysmd3Q99LE3 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
Lysmd3Q99LE3 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.11■□□□□ 0.81
Lysmd3Q99LE3 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Lysmd3Q99LE3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Lysmd3Q99LE3 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lysmd3Q99LE3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lysmd3Q99LE3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lysmd3Q99LE3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Lysmd3Q99LE3 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lysmd3Q99LE3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lysmd3Q99LE3 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Lysmd3Q99LE3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Lysmd3Q99LE3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lysmd3Q99LE3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lysmd3Q99LE3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lysmd3Q99LE3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lysmd3Q99LE3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lysmd3Q99LE3 Gm10849-201ENSMUST00000100397 618 ntBASIC20.09■□□□□ 0.81
Lysmd3Q99LE3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lysmd3Q99LE3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lysmd3Q99LE3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lysmd3Q99LE3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.09■□□□□ 0.81
Lysmd3Q99LE3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.09■□□□□ 0.81
Lysmd3Q99LE3 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.09■□□□□ 0.81
Lysmd3Q99LE3 Golph3-202ENSMUST00000226517 2359 ntBASIC20.09■□□□□ 0.81
Lysmd3Q99LE3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lysmd3Q99LE3 Reep4-203ENSMUST00000226563 1444 ntBASIC20.09■□□□□ 0.81
Lysmd3Q99LE3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Lysmd3Q99LE3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
Lysmd3Q99LE3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lysmd3Q99LE3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Lysmd3Q99LE3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.08■□□□□ 0.81
Lysmd3Q99LE3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lysmd3Q99LE3 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Lysmd3Q99LE3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.08■□□□□ 0.81
Lysmd3Q99LE3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Lysmd3Q99LE3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lysmd3Q99LE3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lysmd3Q99LE3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Lysmd3Q99LE3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.07■□□□□ 0.8
Lysmd3Q99LE3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.07■□□□□ 0.8
Lysmd3Q99LE3 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.07■□□□□ 0.8
Lysmd3Q99LE3 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.07■□□□□ 0.8
Lysmd3Q99LE3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lysmd3Q99LE3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Lysmd3Q99LE3 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Lysmd3Q99LE3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lysmd3Q99LE3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lysmd3Q99LE3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lysmd3Q99LE3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lysmd3Q99LE3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Lysmd3Q99LE3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Lysmd3Q99LE3 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lysmd3Q99LE3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lysmd3Q99LE3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lysmd3Q99LE3 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Lysmd3Q99LE3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lysmd3Q99LE3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lysmd3Q99LE3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lysmd3Q99LE3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Lysmd3Q99LE3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.06■□□□□ 0.8
Lysmd3Q99LE3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Lysmd3Q99LE3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.06■□□□□ 0.8
Lysmd3Q99LE3 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms